RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 EGFP01133 1207 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 FGGP02679 453 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 ASLP04424 464 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 DLDP09622 509 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 MX2P20592 715 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 CD72P21854 359 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 GLDCP23378 1020 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 GARSP41250 739 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 ARF5P84085 180 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 OTUD4Q01804 1114 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 SULT2A1Q06520 285 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 SIGLEC14Q08ET2 396 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 PTPRNQ16849 979 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 IL31Q6EBC2 164 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 ARHGAP36Q6ZRI8 547 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 BZW1Q7L1Q6 419 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 ACTL9Q8TC94 416 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 P3H4Q92791 437 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 FATE1Q969F0 183 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 HDAC11Q96DB2 347 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 MRGPRX3Q96LB0 322 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 BRD8Q9H0E9 1235 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 LTB4R2Q9NPC1 389 aa12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 IPO11Q9UI26 975 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 R3HDM2Q9Y2K5 976 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-206ENST00000600118 KANSL1LA0AUZ9 987 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 J3KR12 359 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 ATP5BP06576 529 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 CHRNB1P11230 501 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 POLR2EP19388 210 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 TARSP26639 723 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 CTSOP43234 321 aaPredicted RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 NUMBP49757 651 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 ECT2LQ008S8 904 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 ZNF33AQ06730 810 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 IL10RBQ08334 325 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 SLC20A2Q08357 652 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 PPIDQ08752 370 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 XRCC4Q13426 336 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 FZD5Q13467 585 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 ENPP2Q13822 863 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 PDK1Q15118 436 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 ATPAF2Q8N5M1 289 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 CCDC33Q8N5R6 958 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 KDM1BQ8NB78 822 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 TTC13Q8NBP0 860 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 SLC35B2Q8TB61 432 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 SORCS1Q8WY21 1168 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 HAUS1Q96CS2 278 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 MYO19Q96H55 970 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 NELL2Q99435 816 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 OSBPL6Q9BZF3 934 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 CIPCQ9C0C6 399 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 TBC1D17Q9HA65 648 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 HS3ST2Q9Y278 367 aa12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 MRPS17Q9Y2R5 130 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 MTF2Q9Y483 593 aaPredicted RBP12.92□□□□□ -0.34
CHMP2A-206ENST00000600118 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 ZSCAN5CA6NGD5 496 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 CBX4O00257 560 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 PGRMC1O00264 195 aaKnown RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 MT-CO1P00395 513 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 SRPRAP08240 638 aaKnown RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 ALADP13716 330 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 CCNCP24863 283 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 PRKD1Q15139 912 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 EGFLAMQ63HQ2 1017 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 RETSATQ6NUM9 610 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 PRELID2Q8N945 189 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 CYB5D2Q8WUJ1 264 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 MAIP1Q8WWC4 291 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 MAML1Q92585 1016 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 NKD2Q969F2 451 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 ZNF599Q96NL3 588 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 QKIQ96PU8 341 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 LGMNQ99538 433 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 FRMD8P1Q9BZ68 369 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 FOXQ1Q9C009 403 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 SMARCAL1Q9NZC9 954 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 THAP10Q9P2Z0 257 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 HPCAL4Q9UM19 191 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 NDRG2Q9UN36 371 aaKnown RBP12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 ERVW-1Q9UQF0 538 aa12.91□□□□□ -0.34
CHMP2A-206ENST00000600118 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 NCOR1O75376 2440 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 HACD1B0YJ81 288 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 PPP1R12AO14974 1030 aaPredicted RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 NPC1O15118 1278 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms