RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ALDH1A2O94788 518 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 KLF8O95600 359 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 C7P10643 843 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 PEX5P50542 639 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 SERINC3Q13530 473 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 CRY1Q16526 586 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 PPP2R5EQ16537 467 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 ZNF528Q3MIS6 628 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 FNDC3BQ53EP0 1204 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 INO80DQ53TQ3 878 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 TFDP3Q5H9I0 405 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 BZW1Q7L1Q6 419 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 SFTPA1Q8IWL2 248 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 TXNDC5Q8NBS9 432 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 PCDH19Q8TAB3 1148 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 HES6Q96HZ4 224 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 MRGPRX3Q96LB0 322 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 SPON2Q9BUD6 331 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 CEP44Q9C0F1 390 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 KLC2Q9H0B6 622 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 GOLPH3Q9H4A6 298 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 NOL6Q9H6R4 1146 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 PRMT8Q9NR22 394 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 VPS51Q9UID3 782 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 HCN2Q9UL51 889 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 HYOU1Q9Y4L1 999 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 MYOFQ9NZM1 2061 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 A0A0U1RQJ8 604 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 CBX4O00257 560 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 GALR2O43603 387 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 ATP9BO43861 1147 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 SYNCRIPO60506 623 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 ZMPSTE24O75844 475 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 CD48P09326 243 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 HOXB2P14652 356 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 MX2P20592 715 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 AMPD1P23109 780 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 PTPN7P35236 360 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 CDKN2BP42772 138 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 NRLP54845 237 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 HNRNPA1L2Q32P51 320 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 SLC9A4Q6AI14 798 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 OR7D4Q8NG98 312 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 ATRIPQ8WXE1 791 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 ISG20Q96AZ6 181 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 CCDC114Q96M63 670 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 PSMB7Q99436 277 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 IRF2BPLQ9H1B7 796 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
SHKBP1-219ENST00000599575 EDDM13A0A1B0GTR0 161 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 SGK1O00141 431 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 ADAM23O75077 832 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 TNNT1P13805 278 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 IL12RB1P42701 662 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 NR2C2P49116 596 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 ZNF33AQ06730 810 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 CAMK2GQ13555 558 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 HS1BP3Q53T59 392 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 SPOCD1Q6ZMY3 1216 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 REXO1L1PQ8IX06 675 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 PLPP6Q8IY26 295 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 SH2D3CQ8N5H7 860 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 CYB5D2Q8WUJ1 264 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 SORCS1Q8WY21 1168 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 FATE1Q969F0 183 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 MYO19Q96H55 970 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 ZNF599Q96NL3 588 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 BRD8Q9H0E9 1235 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 CACNA2D2Q9NY47 1150 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 EBF1Q9UH73 591 aa16.92■□□□□ 0.3
SHKBP1-219ENST00000599575 APOL1O14791 398 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 KIF5CO60282 957 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 ZNF189O75820 626 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 APBB3O95704 486 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 EPHX1P07099 455 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 ACVRL1P37023 503 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 SERPINH1P50454 418 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 IL10RBQ08334 325 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 MMRN1Q13201 1228 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 MEI1Q5TIA1 1274 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 NCBP2-AS2Q69YL0 99 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 MFSD7Q6UXD7 560 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 ARHGAP12Q8IWW6 846 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 CCDC33Q8N5R6 958 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 PQLC3Q8N755 202 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 ATP11CQ8NB49 1132 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 TSTD1Q8NFU3 115 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 KRT35Q92764 455 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 RNF25Q96BH1 459 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 HMCESQ96FZ2 354 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 ACOX2Q99424 681 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 SLC39A8Q9C0K1 460 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 HAUS2Q9NVX0 235 aa16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 FARP1Q9Y4F1 1045 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-219ENST00000599575 DOCK4Q8N1I0 1966 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms