RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ACAP1Q15027 740 aa15.08■□□□□ 0
IRF3-223ENST00000599223 ALFQ53S48 1182 aa15.08■□□□□ 0
IRF3-223ENST00000599223 ARTNQ5T4W7 220 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3GQ6DHY5 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3CQ6IPX1 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 SLC47A2Q86VL8 602 aa15.08■□□□□ 0
IRF3-223ENST00000599223 ZNF683Q8IZ20 524 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3Q8IZP1 549 aaPredicted RBP15.08■□□□□ 0
IRF3-223ENST00000599223 OR8D1Q8WZ84 308 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TSC1Q92574 1164 aa15.08■□□□□ 0
IRF3-223ENST00000599223 LRIG1Q96JA1 1093 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TMPRSS4Q9NRS4 437 aa15.08■□□□□ 0
IRF3-223ENST00000599223 PIGVQ9NUD9 493 aa15.08■□□□□ 0
IRF3-223ENST00000599223 RWDD2AQ9UIY3 292 aa15.08■□□□□ 0
IRF3-223ENST00000599223 PPM1HQ9ULR3 514 aa15.08■□□□□ 0
IRF3-223ENST00000599223 PCDHGA1Q9Y5H4 931 aa15.08■□□□□ 0
IRF3-223ENST00000599223 GCN1Q92616 2671 aaKnown RBP15.07■□□□□ 0
IRF3-223ENST00000599223 K7ERQ8 282 aa15.07■□□□□ 0
IRF3-223ENST00000599223 SLC7A4O43246 635 aa15.07■□□□□ 0
IRF3-223ENST00000599223 SDC3O75056 442 aa15.07■□□□□ 0
IRF3-223ENST00000599223 ADCY5O95622 1261 aa15.07■□□□□ 0
IRF3-223ENST00000599223 LDOC1O95751 146 aaPredicted RBP15.07■□□□□ 0
IRF3-223ENST00000599223 MT-CO1P00395 513 aa15.07■□□□□ 0
IRF3-223ENST00000599223 SLC2A3P11169 496 aa15.07■□□□□ 0
IRF3-223ENST00000599223 DLG2Q15700 870 aa15.07■□□□□ 0
IRF3-223ENST00000599223 ACCSLQ4AC99 568 aa15.07■□□□□ 0
IRF3-223ENST00000599223 EFHC1Q5JVL4 640 aa15.07■□□□□ 0
IRF3-223ENST00000599223 PIP5KL1Q5T9C9 394 aa15.07■□□□□ 0
IRF3-223ENST00000599223 OR6B2Q6IFH4 312 aa15.07■□□□□ 0
IRF3-223ENST00000599223 DPY19L2P1Q6NXN4 242 aa15.07■□□□□ 0
IRF3-223ENST00000599223 GBP6Q6ZN66 633 aa15.07■□□□□ 0
IRF3-223ENST00000599223 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
IRF3-223ENST00000599223 SLC26A9Q7LBE3 791 aa15.07■□□□□ 0
IRF3-223ENST00000599223 TMPRSS12Q86WS5 348 aa15.07■□□□□ 0
IRF3-223ENST00000599223 TRIM69Q86WT6 500 aa15.07■□□□□ 0
IRF3-223ENST00000599223 SH2D3CQ8N5H7 860 aa15.07■□□□□ 0
IRF3-223ENST00000599223 PDCD7Q8N8D1 485 aaKnown RBP15.07■□□□□ 0
IRF3-223ENST00000599223 MFSD2AQ8NA29 543 aa15.07■□□□□ 0
IRF3-223ENST00000599223 PIP4K2CQ8TBX8 421 aa15.07■□□□□ 0
IRF3-223ENST00000599223 RNF34Q969K3 372 aa15.07■□□□□ 0
IRF3-223ENST00000599223 MYOCQ99972 504 aa15.07■□□□□ 0
IRF3-223ENST00000599223 SLC25A13Q9UJS0 675 aa15.07■□□□□ 0
IRF3-223ENST00000599223 VPS28Q9UK41 221 aa15.07■□□□□ 0
IRF3-223ENST00000599223 TBC1D30Q9Y2I9 924 aa15.07■□□□□ 0
IRF3-223ENST00000599223 CHD5Q8TDI0 1954 aa15.06■□□□□ 0
IRF3-223ENST00000599223 A0A087WV48 116 aa15.06■□□□□ 0
IRF3-223ENST00000599223 M0QYT0 321 aa15.06■□□□□ 0
IRF3-223ENST00000599223 MCF2LO15068 1137 aa15.06■□□□□ 0
IRF3-223ENST00000599223 YKT6O15498 198 aa15.06■□□□□ 0
IRF3-223ENST00000599223 BNIP3LO60238 219 aa15.06■□□□□ 0
IRF3-223ENST00000599223 SRCP12931 536 aa15.06■□□□□ 0
IRF3-223ENST00000599223 PRLRP16471 622 aa15.06■□□□□ 0
IRF3-223ENST00000599223 CLCN1P35523 988 aa15.06■□□□□ 0
IRF3-223ENST00000599223 NNMTP40261 264 aa15.06■□□□□ 0
IRF3-223ENST00000599223 RXRGP48443 463 aa15.06■□□□□ 0
IRF3-223ENST00000599223 ARRB1P49407 418 aaPredicted RBP15.06■□□□□ 0
IRF3-223ENST00000599223 CAMK4Q16566 473 aa15.06■□□□□ 0
IRF3-223ENST00000599223 EXOC3L4Q17RC7 722 aa15.06■□□□□ 0
IRF3-223ENST00000599223 C5orf22Q49AR2 442 aa15.06■□□□□ 0
IRF3-223ENST00000599223 HES3Q5TGS1 186 aa15.06■□□□□ 0
IRF3-223ENST00000599223 FBXL19Q6PCT2 694 aa15.06■□□□□ 0
IRF3-223ENST00000599223 CREBRFQ8IUR6 639 aa15.06■□□□□ 0
IRF3-223ENST00000599223 TMEM145Q8NBT3 493 aa15.06■□□□□ 0
IRF3-223ENST00000599223 SKA1Q96BD8 255 aa15.06■□□□□ 0
IRF3-223ENST00000599223 NPY6RQ99463 290 aa15.06■□□□□ 0
IRF3-223ENST00000599223 SIK2Q9H0K1 926 aa15.06■□□□□ 0
IRF3-223ENST00000599223 ERVMER34-1Q9H9K5 563 aa15.06■□□□□ 0
IRF3-223ENST00000599223 SLC12A6Q9UHW9 1150 aa15.06■□□□□ 0
IRF3-223ENST00000599223 VPS51Q9UID3 782 aa15.06■□□□□ 0
IRF3-223ENST00000599223 HS3ST2Q9Y278 367 aa15.06■□□□□ 0
IRF3-223ENST00000599223 COL27A1Q8IZC6 1860 aaPredicted RBP15.06■□□□□ 0
IRF3-223ENST00000599223 TRPM6Q9BX84 2022 aa15.05■□□□□ 0
IRF3-223ENST00000599223 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.05■□□□□ -0
IRF3-223ENST00000599223 GTPBP10A4D1E9 387 aaKnown RBP15.05■□□□□ -0
IRF3-223ENST00000599223 FOXN3O00409 490 aaPredicted RBP15.05■□□□□ -0
IRF3-223ENST00000599223 ALOX15BO15296 676 aa15.05■□□□□ -0
IRF3-223ENST00000599223 SMAD6O43541 496 aaKnown RBP15.05■□□□□ -0
IRF3-223ENST00000599223 TLX3O43711 291 aaPredicted RBP15.05■□□□□ -0
IRF3-223ENST00000599223 FGFR1OPO95684 399 aaKnown RBP15.05■□□□□ -0
IRF3-223ENST00000599223 GLDCP23378 1020 aa15.05■□□□□ -0
IRF3-223ENST00000599223 RRM1P23921 792 aa15.05■□□□□ -0
IRF3-223ENST00000599223 SLC6A3Q01959 620 aa15.05■□□□□ -0
IRF3-223ENST00000599223 ZNF177Q13360 481 aaPredicted RBP15.05■□□□□ -0
IRF3-223ENST00000599223 TRNP1Q6NT89 227 aa15.05■□□□□ -0
IRF3-223ENST00000599223 CAVIN1Q6NZI2 390 aaKnown RBP15.05■□□□□ -0
IRF3-223ENST00000599223 LINGO4Q6UY18 593 aa15.05■□□□□ -0
IRF3-223ENST00000599223 DSG4Q86SJ6 1040 aa15.05■□□□□ -0
IRF3-223ENST00000599223 PRPF39Q86UA1 669 aaKnown RBP15.05■□□□□ -0
IRF3-223ENST00000599223 CHST14Q8NCH0 376 aa15.05■□□□□ -0
IRF3-223ENST00000599223 ZNF397Q8NF99 534 aaPredicted RBP15.05■□□□□ -0
IRF3-223ENST00000599223 OR2A12Q8NGT7 310 aa15.05■□□□□ -0
IRF3-223ENST00000599223 KLK6Q92876 244 aa15.05■□□□□ -0
IRF3-223ENST00000599223 ARRDC3Q96B67 414 aa15.05■□□□□ -0
IRF3-223ENST00000599223 NXPE2Q96DL1 559 aa15.05■□□□□ -0
IRF3-223ENST00000599223 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
IRF3-223ENST00000599223 TKTL2Q9H0I9 626 aa15.05■□□□□ -0
IRF3-223ENST00000599223 MUC3BQ9H195 1237 aa15.05■□□□□ -0
IRF3-223ENST00000599223 KDM4CQ9H3R0 1056 aa15.05■□□□□ -0
IRF3-223ENST00000599223 FZD3Q9NPG1 666 aa15.05■□□□□ -0
IRF3-223ENST00000599223 ARHGEF38Q9NXL2 777 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms