RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MRFAP1L1Q96HT8 127 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 BTBD6Q96KE9 485 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 PACSIN1Q9BY11 444 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 RSPH9Q9H1X1 276 aaPredicted RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 DHX35Q9H5Z1 703 aaKnown RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 ATP13A1Q9HD20 1204 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 WSB2Q9NYS7 404 aaPredicted RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 IP6K2Q9UHH9 426 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 USP18Q9UMW8 372 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 HS3ST2Q9Y278 367 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 BCLAF3A2AJT9 711 aaKnown RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 CBX4O00257 560 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 RNASEH1O60930 286 aaKnown RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 NDUFS2O75306 463 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 MT-CO1P00395 513 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 IGLV3-19P01714 112 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 DNTTP04053 509 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 H2AFZP0C0S5 128 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 SRCP12931 536 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 OXTRP30559 389 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 PCK1P35558 622 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 ACVRL1P37023 503 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 ETFBP38117 255 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 MPLP40238 635 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 PTGER3P43115 390 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 TPI1P60174 286 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 ZBTB16Q05516 673 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 DLG2Q15700 870 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 CCDC6Q16204 474 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 SPDYCQ5MJ68 293 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 IL31Q6EBC2 164 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 LINGO4Q6UY18 593 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 H2AFVQ71UI9 128 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 ARMCX6Q7L4S7 300 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 CYP2U1Q7Z449 544 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 MMAAQ8IVH4 418 aaKnown RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 NIPA2Q8N8Q9 360 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 ATP11CQ8NB49 1132 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 ZNF564Q8TBZ8 553 aaPredicted RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 CTNNBL1Q8WYA6 563 aaPredicted RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 ARHGEF2Q92974 986 aaKnown RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 TOE1Q96GM8 510 aaKnown RBP14.18□□□□□ -0.14
UPF1-205ENST00000598209 FAM129BQ96TA1 746 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 CATSPERBQ9H7T0 1116 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 SEMA4GQ9NTN9 838 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 SPTLC3Q9NUV7 552 aa14.18□□□□□ -0.14
UPF1-205ENST00000598209 WASH4PA8MWX3 477 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 K7ERQ8 282 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 MYO1FO00160 1098 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 EEF2KO00418 725 aaKnown RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 FGF10O15520 208 aaPredicted RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 RAMP2O60895 175 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 ZMPSTE24O75844 475 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 TCF4P15884 667 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 HTR7P34969 479 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 ELAVL3Q14576 367 aaKnown RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 POLD3Q15054 466 aaPredicted RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 CST6Q15828 149 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 CSRP2Q16527 193 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 TTC31Q49AM3 519 aaPredicted RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 PLA2G2CQ5R387 149 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 LYSMD4Q5XG99 296 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 RETSATQ6NUM9 610 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 Q6ZVU0 165 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 FAM124AQ86V42 546 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 PSTKQ8IV42 348 aaKnown RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 KCTD15Q96SI1 283 aaPredicted RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 GPR174Q9BXC1 333 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 ACE2Q9BYF1 805 aaPredicted RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 MAGEH1Q9H213 219 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 PABPC3Q9H361 631 aaKnown RBP14.17□□□□□ -0.14
UPF1-205ENST00000598209 CTTNBP2NLQ9P2B4 639 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 UVRAGQ9P2Y5 699 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 SCML1Q9UN30 329 aa14.17□□□□□ -0.14
UPF1-205ENST00000598209 FRYLO94915 3013 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 MID1O15344 667 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 SMAD6O43541 496 aaKnown RBP14.16□□□□□ -0.14
UPF1-205ENST00000598209 BNIP3LO60238 219 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 TMEM253P0C7T8 217 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 ZNF806P0C7X5 589 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 IL1R2P27930 398 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 PSMD8P48556 350 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 CLCN6P51797 869 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 ARF5P84085 180 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 ZNF33AQ06730 810 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 SLC20A2Q08357 652 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 SMTNL2Q2TAL5 461 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 PPP6R3Q5H9R7 873 aaPredicted RBP14.16□□□□□ -0.14
UPF1-205ENST00000598209 PRR23CQ6ZRP0 262 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 SLC41A1Q8IVJ1 513 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 GANCQ8TET4 914 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 OR8D1Q8WZ84 308 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 PIGKQ92643 395 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 HSPA12BQ96MM6 686 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 SMOC1Q9H4F8 434 aa14.16□□□□□ -0.14
UPF1-205ENST00000598209 NOL6Q9H6R4 1146 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms