RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SLC31A1O15431 190 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 RRP8O43159 456 aaKnown RBP10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 TLX3O43711 291 aaPredicted RBP10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 ATP9BO43861 1147 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 HSF2BPO75031 334 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 GLI1P08151 1106 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 SLC9A1P19634 815 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 ITPKBP27987 946 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 GGCXP38435 758 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 MARSP56192 900 aaKnown RBP10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 DAB2P98082 770 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 OVGP1Q12889 678 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 ILKQ13418 452 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 AGBL4Q5VU57 503 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 FOXR2Q6PJQ5 311 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 Q6ZVU0 165 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 IQCHQ86VS3 1027 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 TRIM69Q86WT6 500 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 PASD1Q8IV76 773 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 SH2D3CQ8N5H7 860 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 OR52K2Q8NGK3 314 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 KLK6Q92876 244 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 ALG14Q96F25 216 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 NOX5Q96PH1 765 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 SLC2A13Q96QE2 648 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 CPXM1Q96SM3 734 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 MYOCQ99972 504 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 FEM1AQ9BSK4 669 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 NRSN2Q9GZP1 204 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 MUC3BQ9H195 1237 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 ASNSD1Q9NWL6 643 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 PPM1HQ9ULR3 514 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 HS3ST4Q9Y661 456 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 FREM2Q5SZK8 3169 aa10.85□□□□□ -0.67
CHMP2A-202ENST00000596708 BECN2A8MW95 431 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 M0QYT0 321 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 ALOX15BO15296 676 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 RNGTTO60942 597 aaKnown RBP10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 PAGE1O75459 146 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 CLDN11O75508 207 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 RHOCP08134 193 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 THEGLP0DJG4 465 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 GLDCP23378 1020 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 EIF2S3P41091 472 aaKnown RBP10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 IRAK1P51617 712 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 CDH4P55283 916 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 SNX16P57768 344 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 KRT83P78385 493 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 CCDC15Q0P6D6 951 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 MTA1Q13330 715 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 BECN1Q14457 450 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 SFMBT2Q5VUG0 894 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 TRIM65Q6PJ69 517 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 GBP6Q6ZN66 633 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 C11orf57Q6ZUT1 292 aaPredicted RBP10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 FAM183BPQ6ZVS7 135 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 KANSL1Q7Z3B3 1105 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 C14orf80Q86SX3 495 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 WDTC1Q8N5D0 677 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 ATP11CQ8NB49 1132 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 C1orf131Q8NDD1 294 aaKnown RBP10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 BAP1Q92560 729 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 FAM131CQ96AQ9 280 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 CCDC114Q96M63 670 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 UBL7Q96S82 380 aaPredicted RBP10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 SYNCQ9H7C4 482 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 PREBQ9HCU5 417 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 DYRK4Q9NR20 520 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 CLCA2Q9UQC9 943 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 CHD5Q8TDI0 1954 aa10.84□□□□□ -0.67
CHMP2A-202ENST00000596708 A0A1W2PQU0 124 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 KPNA3O00505 521 aaPredicted RBP10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 SIGLEC6O43699 453 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 CNTN5O94779 1100 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 PCDH8O95206 1070 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 SRCP12931 536 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 ACP1P24666 158 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 CHRNA3P32297 505 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 NOS2P35228 1153 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 KRT9P35527 623 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 RNASE9P60153 205 aaKnown RBP10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 E2F1Q01094 437 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 SLC6A3Q01959 620 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 APBA1Q02410 837 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 PTK2Q05397 1052 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 RTP5Q14D33 572 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 KDM7AQ6ZMT4 941 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 TKTL2Q9H0I9 626 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 WDCPQ9H6R7 721 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 PCDHGC3Q9UN70 934 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 OR51B4Q9Y5P0 310 aa10.83□□□□□ -0.68
CHMP2A-202ENST00000596708 LRRK1Q38SD2 2015 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 TRIM38O00635 465 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 FFAR2O15552 330 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 BRINP1O60477 761 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 SNAP91O60641 907 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 DAB1O75553 588 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 MT-CO1P00395 513 aa10.82□□□□□ -0.68
CHMP2A-202ENST00000596708 MT-CO3P00414 261 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms