RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 RLFQ13129 1914 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 PPEF2O14830 753 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 PSMC3P17980 439 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 DCAF6Q58WW2 860 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 KCNMB4Q86W47 210 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 TP53INP2Q8IXH6 220 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 ACVR1CQ8NER5 493 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 VPS39Q96JC1 886 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 APOL2Q9BQE5 337 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 SENP6Q9GZR1 1112 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 DRC3Q9H069 523 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 IARS2Q9NSE4 1012 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 RHBDL2Q9NX52 303 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 THEGQ9P2T0 379 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 PARP14Q460N5 1801 aa17.71■□□□□ 0.43
ARHGEF1-213ENST00000595897 CCDC78A2IDD5 438 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 HPCAP84074 193 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 BST2Q10589 180 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 PRKAA1Q13131 559 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 LIPMQ5VYY2 423 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 CLEC14AQ86T13 490 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 TRIML2Q8N7C3 387 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 NPAS2Q99743 824 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 RBM38Q9H0Z9 239 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 FAM124BQ9H5Z6 455 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 ZDHHC2Q9UIJ5 367 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 FZD10Q9ULW2 581 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 TRIP11Q15643 1979 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 CYP2C8P10632 490 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 DPP6P42658 865 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 PGGT1BP53609 377 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 PTK2BQ14289 1009 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 MYBPC3Q14896 1274 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 STRADAQ7RTN6 431 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 TICAM1Q8IUC6 712 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 DEFB106AQ8N104 65 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 NDRG1Q92597 394 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 KLHL32Q96NJ5 620 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 SEMA6AQ9H2E6 1030 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 IGSF9Q9P2J2 1179 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 ANK1P16157 1881 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 H3BSA7 217 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 PHGDHO43175 533 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 BCAS2O75934 225 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 GMPSP49915 693 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 BCAT1P54687 386 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 TREML2Q5T2D2 321 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 CERCAMQ5T4B2 595 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 TMEM135Q86UB9 458 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 ZNF410Q86VK4 478 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 PSTKQ8IV42 348 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 FBXO16Q8IX29 292 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 CCNYL1Q8N7R7 359 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 MPHOSPH6Q99547 160 aaKnown RBP17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 NFKBIZQ9BYH8 718 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 VPS28Q9UK41 221 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 NME7Q9Y5B8 376 aa17.7■□□□□ 0.42
ARHGEF1-213ENST00000595897 ZCWPW2A0A1B0GU75 182 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 C22orf31O95567 290 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 STAU1O95793 577 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 APOA4P06727 396 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 INSRRP14616 1297 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 PCSK6P29122 969 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 AVPR1AP37288 418 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 SLC26A2P50443 739 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 NME3Q13232 169 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 ITGA7Q13683 1181 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 KYAT1Q16773 422 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 PTAR1Q7Z6K3 402 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 RIOX2Q8IUF8 465 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 CCT7Q99832 543 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 ZBTB26Q9HCK0 441 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 RCOR3Q9P2K3 495 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 PRSS51A0A1B0GVH4 220 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 GRID2O43424 1007 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 JUNP05412 331 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 TPH1P17752 444 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 MATKP42679 507 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 USP10Q14694 798 aaKnown RBP17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 FAM187BQ17R55 369 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 ANKRD52Q8NB46 1076 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 SPATC1LQ9H0A9 340 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 TIMMDC1Q9NPL8 285 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 CHRAC1Q9NRG0 131 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 RNF19AQ9NV58 838 aa17.69■□□□□ 0.42
ARHGEF1-213ENST00000595897 TRMUO75648 421 aaKnown RBP17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 RNASEH2AO75792 299 aaKnown RBP17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 CSPG5O95196 566 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 VAPBO95292 243 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 ZYG11AQ6WRX3 759 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 KLRG1Q96E93 195 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 VTI1BQ9UEU0 232 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 RUVBL2Q9Y230 463 aaKnown RBP17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 UTRNP46939 3433 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 SSC5DA1L4H1 1573 aa17.68■□□□□ 0.42
ARHGEF1-213ENST00000595897 PTPRFP10586 1907 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms