RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 EFHC2Q5JST6 749 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 LYSMD4Q5XG99 296 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF776Q68DI1 518 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 RWDD4Q6NW29 188 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 SARM1Q6SZW1 724 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF783Q6ZMS7 281 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 FAM124AQ86V42 546 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 STK40Q8N2I9 435 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 PIGKQ92643 395 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 TBC1D31Q96DN5 1066 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ARHGEF26Q96DR7 871 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 TRIM11Q96F44 468 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF419Q96HQ0 510 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 HSPA12BQ96MM6 686 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 PPP1R9BQ96SB3 815 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 C2orf49Q9BVC5 232 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 RBSNQ9H1K0 784 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 NOL6Q9H6R4 1146 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 GPATCH2LQ9NWQ4 482 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC25A13Q9UJS0 675 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 PILRBQ9UKJ0 227 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
SHKBP1-206ENST00000595523 LRRK1Q38SD2 2015 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 TRPM6Q9BX84 2022 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 PCNX2A6NKB5 2137 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 MID1O15344 667 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 MFAP3LO75121 409 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 CD160O95971 181 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 CYP1A2P05177 515 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ACADMP11310 421 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 TCF4P15884 667 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 MIPP30301 263 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 OXTRP30559 389 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ACSL1P33121 698 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ACVRL1P37023 503 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 MAPKAPK2P49137 400 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 METAP1P53582 386 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 AIF1P55008 147 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ARF5P84085 180 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 GFPT1Q06210 699 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ELAVL3Q14576 367 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 DLG2Q15700 870 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 CST6Q15828 149 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 RSPO4Q2I0M5 234 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ALKBH5Q6P6C2 394 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 LINGO4Q6UY18 593 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 Q6ZVU0 165 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 VPS36Q86VN1 386 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 SYT12Q8IV01 421 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 MMAAQ8IVH4 418 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 AADATQ8N5Z0 425 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 SNRNP25Q9BV90 132 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 GPR174Q9BXC1 333 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ACE2Q9BYF1 805 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 PABPC3Q9H361 631 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ABHD10Q9NUJ1 306 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 DNAI1Q9UI46 699 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 AP4E1Q9UPM8 1137 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 ACTL7AQ9Y615 435 aa11.25□□□□□ -0.61
SHKBP1-206ENST00000595523 CEP295Q9C0D2 2601 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 LNP1A1A4G5 178 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 C10orf142B7Z368 130 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 RNF103O00237 685 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 CBX4O00257 560 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 CREB3O43889 395 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 NDUFS2O75306 463 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF821O75541 412 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 DNTTP04053 509 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 CTSLP07711 333 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 IL1R2P27930 398 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 EPHB2P29323 1055 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 DRD3P35462 400 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 NNMTP40261 264 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 PSMD8P48556 350 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 GALCP54803 685 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 KRT83P78385 493 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 IRX4P78413 519 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 SLC18A3Q16572 532 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 USP30Q70CQ3 517 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 RTL3Q8N8U3 475 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 CADM4Q8NFZ8 388 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 ARHGEF2Q92974 986 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 BTBD6Q96KE9 485 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 KCTD15Q96SI1 283 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 CHP1Q99653 195 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 NUP85Q9BW27 656 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 PACSIN1Q9BY11 444 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 C6orf106Q9H6K1 298 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 RETREG1Q9H6L5 497 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 ATP13A1Q9HD20 1204 aa11.24□□□□□ -0.61
SHKBP1-206ENST00000595523 MRPL47Q9HD33 250 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms