RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 CALN1Q9BXU9 219 aa23.43■■□□□ 1.34
PNKP-205ENST00000595081 ACE2Q9BYF1 805 aaPredicted RBP23.43■■□□□ 1.34
PNKP-205ENST00000595081 KLC2Q9H0B6 622 aa23.43■■□□□ 1.34
PNKP-205ENST00000595081 ETNK2Q9NVF9 386 aa23.43■■□□□ 1.34
PNKP-205ENST00000595081 RASA4BC9J798 803 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 RASA4O43374 803 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 NRDCO43847 1150 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 ZMPSTE24O75844 475 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 HOXA6P31267 233 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 ETFBP38117 255 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 LRRC38Q5VT99 294 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 RHOT1Q8IXI2 618 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 KDM1BQ8NB78 822 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 MDGA1Q8NFP4 955 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 NELL1Q92832 810 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 SLC6A17Q9H1V8 727 aa23.42■■□□□ 1.34
PNKP-205ENST00000595081 GRID2IPA4D2P6 1211 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 K7ERQ8 282 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 DCLK1O15075 740 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 ALDH1A2O94788 518 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 KRT1P04264 644 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 VAV1P15498 845 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 GABRG2P18507 467 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 ARF5P84085 180 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 PDK2Q15119 407 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 HNRNPA1L2Q32P51 320 aaKnown RBP23.41■■□□□ 1.34
PNKP-205ENST00000595081 RASSF3Q86WH2 238 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 ZNF354CQ86Y25 554 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 CALR3Q96L12 384 aaKnown RBP23.41■■□□□ 1.34
PNKP-205ENST00000595081 TPSD1Q9BZJ3 242 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 LRRC19Q9H756 370 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 FAM86C1Q9NVL1 165 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 ZSCAN32Q9NX65 697 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 DONSONQ9NYP3 566 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 BCCIPQ9P287 314 aaKnown RBP eCLIP23.41■■□□□ 1.34
PNKP-205ENST00000595081 RCOR3Q9P2K3 495 aaPredicted RBP23.41■■□□□ 1.34
PNKP-205ENST00000595081 HS3ST2Q9Y278 367 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 ACTL7AQ9Y615 435 aa23.41■■□□□ 1.34
PNKP-205ENST00000595081 LRRD1A4D1F6 860 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 CCDC175P0C221 793 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 SRCP12931 536 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 KDELR1P24390 212 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 NNMTP40261 264 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 MARCKSL1P49006 195 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 NDST2P52849 883 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 NRLP54845 237 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 YBEYP58557 167 aaPredicted RBP23.4■■□□□ 1.34
PNKP-205ENST00000595081 CAMK2GQ13555 558 aaPredicted RBP23.4■■□□□ 1.34
PNKP-205ENST00000595081 PARP15Q460N3 678 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 ACCSLQ4AC99 568 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 LEKR1Q6ZMV7 388 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 MAP7D3Q8IWC1 876 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 ARHGAP12Q8IWW6 846 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 PGBD3Q8N328 593 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 SH2D3CQ8N5H7 860 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 LRRC57Q8N9N7 239 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 ATP11CQ8NB49 1132 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 ZNF830Q96NB3 372 aaPredicted RBP23.4■■□□□ 1.34
PNKP-205ENST00000595081 ZNF670Q9BS34 389 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 FAM126AQ9BYI3 521 aaPredicted RBP23.4■■□□□ 1.34
PNKP-205ENST00000595081 SLC39A8Q9C0K1 460 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 KCNF1Q9H3M0 494 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 PRSS16Q9NQE7 514 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 EBF1Q9UH73 591 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 SUN2Q9UH99 717 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 R4GN57 208 aa23.4■■□□□ 1.34
PNKP-205ENST00000595081 AXIN1O15169 862 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 SMAD6O43541 496 aaKnown RBP23.39■■□□□ 1.33
PNKP-205ENST00000595081 PSTPIP1O43586 416 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 ATP9BO43861 1147 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 SIN3BO75182 1162 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 NDUFV2P19404 249 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 VASPP50552 380 aaPredicted RBP23.39■■□□□ 1.33
PNKP-205ENST00000595081 DLG2Q15700 870 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 ANKRD20A8PQ5CZ79 823 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 AFMIDQ63HM1 303 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 RETSATQ6NUM9 610 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 TMCO3Q6UWJ1 677 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 WDR5BQ86VZ2 330 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 LONP2Q86WA8 852 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 CACUL1Q86Y37 369 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 TP53INP2Q8IXH6 220 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 PCDH19Q8TAB3 1148 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 FRS2Q8WU20 508 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 ATOH1Q92858 354 aaPredicted RBP23.39■■□□□ 1.33
PNKP-205ENST00000595081 MKRN2Q9H000 416 aaKnown RBP23.39■■□□□ 1.33
PNKP-205ENST00000595081 HPCAL4Q9UM19 191 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 CHD5Q8TDI0 1954 aa23.39■■□□□ 1.33
PNKP-205ENST00000595081 CKAP5Q14008 2032 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 C3orf70A6NLC5 250 aaPredicted RBP23.38■■□□□ 1.33
PNKP-205ENST00000595081 KDELR3O43731 214 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 PALMO75781 387 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 PAPOLAP51003 745 aaKnown RBP23.38■■□□□ 1.33
PNKP-205ENST00000595081 COPAP53621 1224 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 SERINC3Q13530 473 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 IFI16Q16666 785 aaKnown RBP23.38■■□□□ 1.33
PNKP-205ENST00000595081 C9orf64Q5T6V5 341 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 ZBTB44Q8NCP5 570 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 KIAA1524Q8TCG1 905 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 KRT35Q92764 455 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms