RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 SLC26A9Q7LBE3 791 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 IRF2BP1Q8IU81 584 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 ZNF683Q8IZ20 524 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 PIP4K2CQ8TBX8 421 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 RFFLQ8WZ73 363 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 PPP1R9BQ96SB3 815 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 PSMB7Q99436 277 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 ANLNQ9NQW6 1124 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 VANGL2Q9ULK5 521 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 KALRNO60229 2985 aa16.33■□□□□ 0.21
GTF2F1-203ENST00000594213 SYNJ2BP-COX16A0A087WUM0 186 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 I6L893 689 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 PAGE1O75459 146 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 CLDN11O75508 207 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 MT-CO1P00395 513 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 ERBB2P04626 1255 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 CTSLP07711 333 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 CKMT2P17540 419 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 MAT2AP31153 395 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 ZNF177Q13360 481 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 ARHGAP44Q17R89 818 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 HES3Q5TGS1 186 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 FAM183BPQ6ZVS7 135 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 TMEM145Q8NBT3 493 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 RNF34Q969K3 372 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 NXPE2Q96DL1 559 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 NRSN2Q9GZP1 204 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 PREBQ9HCU5 417 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 COX16Q9P0S2 106 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 SLC25A13Q9UJS0 675 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 AJAP1Q9UKB5 411 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 HS3ST2Q9Y278 367 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 HELZ2Q9BYK8 2649 aaKnown RBP16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 PTPRQQ9UMZ3 2332 aa16.33■□□□□ 0.2
GTF2F1-203ENST00000594213 GCN1Q92616 2671 aaKnown RBP16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 GTPBP10A4D1E9 387 aaKnown RBP16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 PRAMEF26H0Y7S4 382 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 TLX3O43711 291 aaPredicted RBP16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 MAGEC1O60732 1142 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 DAB1O75553 588 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 CNTN5O94779 1100 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 SRCP12931 536 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 PON1P27169 355 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 NOS2P35228 1153 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 HNF1BP35680 557 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 GGCXP38435 758 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 CXCR3P49682 368 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 CDH4P55283 916 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 SLC6A3Q01959 620 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 POM121L1PQ3SYA9 428 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 C6orf118Q5T5N4 469 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 PIP5KL1Q5T9C9 394 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 OR6B2Q6IFH4 312 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 DPY19L2P1Q6NXN4 242 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 GBP6Q6ZN66 633 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 SLC25A45Q8N413 288 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 C1orf131Q8NDD1 294 aaKnown RBP16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 NT5C3BQ969T7 300 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 NPY6RQ99463 290 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 SIX2Q9NPC8 291 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 PIGVQ9NUD9 493 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 ARHGEF38Q9NXL2 777 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 VPS28Q9UK41 221 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 CA5BQ9Y2D0 317 aa16.32■□□□□ 0.2
GTF2F1-203ENST00000594213 DRGXA6NNA5 263 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 C1QTNF3-AMACRE9PGA6 284 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 RNF103O00237 685 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 TRIM38O00635 465 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 SNAP91O60641 907 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 RNGTTO60942 597 aaKnown RBP16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 ADCY5O95622 1261 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 TFE3P19532 575 aaPredicted RBP16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 ACP1P24666 158 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 ITPKBP27987 946 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 CLCN1P35523 988 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 USP8P40818 1118 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 EIF2S3P41091 472 aaKnown RBP16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 NME3Q13232 169 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 STAT4Q14765 748 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 EXOC3L4Q17RC7 722 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 SETMARQ53H47 684 aaPredicted RBP16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 ALFQ53S48 1182 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 NEK5Q6P3R8 708 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 TMIEQ8NEW7 156 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 OR2A12Q8NGT7 310 aa16.31■□□□□ 0.2
GTF2F1-203ENST00000594213 K7ERQ8 282 aa16.3■□□□□ 0.2
GTF2F1-203ENST00000594213 M0QYT0 321 aa16.3■□□□□ 0.2
GTF2F1-203ENST00000594213 FOXN3O00409 490 aaPredicted RBP16.3■□□□□ 0.2
GTF2F1-203ENST00000594213 SMAD6O43541 496 aaKnown RBP16.3■□□□□ 0.2
GTF2F1-203ENST00000594213 SIGLEC6O43699 453 aa16.3■□□□□ 0.2
GTF2F1-203ENST00000594213 GIMD1P0DJR0 217 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms