RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 C6orf118Q5T5N4 469 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 TFAP2DQ7Z6R9 452 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 SETD3Q86TU7 594 aaPredicted RBP20.12■□□□□ 0.81
LSM4-203ENST00000593829 RHOT2Q8IXI1 618 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 GABRG3Q99928 467 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 FAM126AQ9BYI3 521 aaPredicted RBP20.12■□□□□ 0.81
LSM4-203ENST00000593829 CACNA2D2Q9NY47 1150 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 OR1E1P30953 314 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 HOXA6P31267 233 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 WASP42768 502 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 PLK1P53350 603 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 ZNF234Q14588 700 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 DAB2IPQ5VWQ8 1189 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 CREG2Q8IUH2 290 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 PSTKQ8IV42 348 aaKnown RBP20.12■□□□□ 0.81
LSM4-203ENST00000593829 APCDD1Q8J025 514 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 CYB5D2Q8WUJ1 264 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 RFFLQ8WZ73 363 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 FEM1AQ9BSK4 669 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 SNRNP25Q9BV90 132 aaKnown RBP20.12■□□□□ 0.81
LSM4-203ENST00000593829 OSGEPQ9NPF4 335 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 PCDHA13Q9Y5I0 950 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 STON1Q9Y6Q2 735 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 CREB3O43889 395 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 ASLP04424 464 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 RHOCP08134 193 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 HOXB2P14652 356 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 RHOQP17081 205 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 MZF1P28698 734 aaPredicted RBP20.11■□□□□ 0.81
LSM4-203ENST00000593829 BOLA3Q53S33 107 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 TMEM92Q6UXU6 159 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 CYP4V2Q6ZWL3 525 aaPredicted RBP20.11■□□□□ 0.81
LSM4-203ENST00000593829 TSTD1Q8NFU3 115 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 HHIPQ96QV1 700 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 DHX35Q9H5Z1 703 aaKnown RBP20.11■□□□□ 0.81
LSM4-203ENST00000593829 GPATCH2LQ9NWQ4 482 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 ZNF212Q9UDV6 495 aa20.11■□□□□ 0.81
LSM4-203ENST00000593829 WASH3PC4AMC7 463 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 PROSCO94903 275 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 APBB3O95704 486 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 MYBL2P10244 700 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 TCP1P17987 556 aaKnown RBP20.1■□□□□ 0.81
LSM4-203ENST00000593829 IL12RB1P42701 662 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 SEMA3BQ13214 749 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 ENPP2Q13822 863 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 RNF219Q5W0B1 726 aaPredicted RBP20.1■□□□□ 0.81
LSM4-203ENST00000593829 OR52K2Q8NGK3 314 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 ATOH1Q92858 354 aaPredicted RBP20.1■□□□□ 0.81
LSM4-203ENST00000593829 CAPZA3Q96KX2 299 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 MUC3BQ9H195 1237 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 POLMQ9NP87 494 aaPredicted RBP20.1■□□□□ 0.81
LSM4-203ENST00000593829 ZSCAN32Q9NX65 697 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 NEU3Q9UQ49 428 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 GOLGA6CA6NDK9 693 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 OPA1O60313 960 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 MTA2O94776 668 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 GOLGA6DP0CG33 693 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 IL1R2P27930 398 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 EPHB2P29323 1055 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 HTR7P34969 479 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 SULT2A1Q06520 285 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 CA9Q16790 459 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 PTPRNQ16849 979 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 FNDC3BQ53EP0 1204 aaKnown RBP20.1■□□□□ 0.81
LSM4-203ENST00000593829 ALS2CLQ60I27 953 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 ICE2Q659A1 982 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 EMBQ6PCB8 327 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 SERPINA13PQ6UXR4 307 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 ZNF783Q6ZMS7 281 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 NLRP14Q86W24 1093 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 NELL1Q92832 810 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 ALG14Q96F25 216 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 TMEM248Q9NWD8 314 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 GOLGA6AQ9NYA3 693 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 VPS28Q9UK41 221 aa20.1■□□□□ 0.81
LSM4-203ENST00000593829 TCF4P15884 667 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 HOXC13P31276 330 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 SSR1P43307 286 aaKnown RBP20.09■□□□□ 0.81
LSM4-203ENST00000593829 MAPKAPK2P49137 400 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 ECT2LQ008S8 904 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 HEATR6Q6AI08 1181 aaKnown RBP20.09■□□□□ 0.81
LSM4-203ENST00000593829 PACS2Q86VP3 889 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 CAVIN3Q969G5 261 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 ZWILCHQ9H900 591 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 OR51B4Q9Y5P0 310 aa20.09■□□□□ 0.81
LSM4-203ENST00000593829 A0A1W2PQF6 199 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 ILVBLA1L0T0 632 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 ALDH1A2O94788 518 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 MAN1A1P33908 653 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 TPI1P60174 286 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 ST8SIA6P61647 398 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 SKOR1P84550 965 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 SLC25A11Q02978 314 aaKnown RBP20.08■□□□□ 0.81
LSM4-203ENST00000593829 MESDQ14696 234 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 STARD3Q14849 445 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 HADHQ16836 314 aaKnown RBP20.08■□□□□ 0.81
LSM4-203ENST00000593829 TEKT4Q8WW24 435 aa20.08■□□□□ 0.81
LSM4-203ENST00000593829 TMEM245Q9H330 911 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms