RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FAM46CQ5VWP2 391 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 WDR59Q6PJI9 974 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 IL27RAQ6UWB1 636 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 Q6ZVU0 165 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 AADATQ8N5Z0 425 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 OR2I1PQ8NGU4 316 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 C1orf216Q8TAB5 229 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 MCEEQ96PE7 176 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 PSMB7Q99436 277 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 RAB6CQ9H0N0 254 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 OSBPL2Q9H1P3 480 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 RETREG1Q9H6L5 497 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 CBX8Q9HC52 389 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 DNAAF2Q9NVR5 837 aaKnown RBP15.65■□□□□ 0.1
TRIM28-203ENST00000593582 VPS51Q9UID3 782 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-203ENST00000593582 PI4KAP42356 2102 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 CNOT1A5YKK6 2376 aaKnown RBP15.64■□□□□ 0.09
TRIM28-203ENST00000593582 UPK3BL1B0FP48 263 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 UPK3BL2E5RIL1 263 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 GIPC1O14908 333 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 MCF2LO15068 1137 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 ALOX15BO15296 676 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 BNIP3LO60238 219 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 MT-CO1P00395 513 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 SRCP12931 536 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 DESP17661 470 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 CLCN6P51797 869 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 ZNF143P52747 638 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-203ENST00000593582 SEMA3BQ13214 749 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 SLC14A1Q13336 389 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 TEAD4Q15561 434 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 ARTNQ5T4W7 220 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 SFMBT2Q5VUG0 894 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 KIAA0895LQ68EN5 471 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 RWDD4Q6NW29 188 aaKnown RBP15.64■□□□□ 0.09
TRIM28-203ENST00000593582 DCUN1D2Q6PH85 259 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 NCEH1Q6PIU2 408 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 LUZP1Q86V48 1076 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 DRC7Q8IY82 874 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 MCOLN2Q8IZK6 566 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 DEFB124Q8NES8 71 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 OR2T34Q8NGX1 318 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 OR14C36Q8NHC7 312 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 NTAN1Q96AB6 310 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 VCPIP1Q96JH7 1222 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 SPON2Q9BUD6 331 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 EDEM3Q9BZQ6 932 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 TM9SF3Q9HD45 589 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 OSGEPQ9NPF4 335 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 AIPL1Q9NZN9 384 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 ZNF212Q9UDV6 495 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 PPM1HQ9ULR3 514 aa15.64■□□□□ 0.09
TRIM28-203ENST00000593582 TCRBV5S1A1TA0A578 114 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 TMCO5BA8MYB1 307 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 C1QTNF3-AMACRE9PGA6 284 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 GOLGA6L19H0YKK7 550 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 CBX4O00257 560 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 PLEKP08567 350 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-203ENST00000593582 RRM1P23921 792 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 ETFBP38117 255 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 CSNK1EP49674 416 aaKnown RBP15.63■□□□□ 0.09
TRIM28-203ENST00000593582 ADPRHP54922 357 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 RPL7AP62424 266 aaKnown RBP15.63■□□□□ 0.09
TRIM28-203ENST00000593582 GNA12Q03113 381 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 MANEALQ5VSG8 457 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 RETSATQ6NUM9 610 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 LINGO4Q6UY18 593 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-203ENST00000593582 SLFN11Q7Z7L1 901 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 PIP4P1Q86T03 277 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 CCDC185Q8N715 623 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 OR7D4Q8NG98 312 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 TBC1D31Q96DN5 1066 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 CNPY3Q9BT09 278 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 SYT11Q9BT88 431 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 HAUS4Q9H6D7 363 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 ATP13A1Q9HD20 1204 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 PARVAQ9NVD7 372 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 SARDHQ9UL12 918 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 TPX2Q9ULW0 747 aaKnown RBP15.63■□□□□ 0.09
TRIM28-203ENST00000593582 PCDH15Q96QU1 1955 aa15.63■□□□□ 0.09
TRIM28-203ENST00000593582 A0A1B0GVT2 93 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 K7ERQ8 282 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 LRIG2O94898 1065 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 CER1O95813 267 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 IGHV4-34P06331 123 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 RHOQP17081 205 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 DRD3P35462 400 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 RECQLP46063 649 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-203ENST00000593582 GRIA4P48058 902 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 MAPKAPK2P49137 400 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 ZNF252P-AS1Q0IIN9 211 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 SCAPQ12770 1279 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 EFHC2Q5JST6 749 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 PPP1R15BQ5SWA1 713 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 SCYL2Q6P3W7 929 aa15.62■□□□□ 0.09
TRIM28-203ENST00000593582 ADAT2Q7Z6V5 191 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms