RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 E2F8A0AVK6 867 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 H0Y3Z8 333 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 ASGR1P07306 291 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 SLC10A3P09131 477 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 TPH1P17752 444 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 TYMPP19971 482 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 PGM1P36871 562 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 FCGRTP55899 365 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 ABCE1P61221 599 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 EIF4EBP2Q13542 120 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 KLHDC8BQ8IXV7 354 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 CFAP61Q8NHU2 1237 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 ZSCAN18Q8TBC5 510 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 SREK1Q8WXA9 508 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 AZIN2Q96A70 460 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 PTPRDP23468 1912 aa16.89■□□□□ 0.29
PRKCSH-217ENST00000592741 A0A096LPK6 155 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 CACNG3O60359 315 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 ADAMTS4O75173 837 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 YY1P25490 414 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 CCR1P32246 355 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 GRIK1P39086 918 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 HADHAP40939 763 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 SLC5A3P53794 718 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 DNAL1Q4LDG9 190 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 PDPK2PQ6A1A2 396 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 OTOP3Q7RTS5 596 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 LZTR1Q8N653 840 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 CNTD1Q8N815 330 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 SORT1Q99523 831 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 TBL1YQ9BQ87 522 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 SMOC2Q9H3U7 446 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 ZNF358Q9NW07 568 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 DNAJC28Q9NX36 388 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 APOBEC2Q9Y235 224 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 NLRC5Q86WI3 1866 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 MAGEC1O60732 1142 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 PAGE1O75459 146 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 NMBRP28336 390 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 HOXC13P31276 330 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 HARS2P49590 506 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 SREBF2Q12772 1141 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 ITGA9Q13797 1035 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 KPNB1Q14974 876 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 ARHGAP36Q6ZRI8 547 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 ARHGAP12Q8IWW6 846 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 PLD6Q8N2A8 252 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 KIFC1Q9BW19 673 aa16.88■□□□□ 0.29
PRKCSH-217ENST00000592741 PRR5-ARHGAP8B1AHC4 643 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ANXA9O76027 345 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 KLHL2O95198 593 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 GMPRP36959 345 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ARHGAP8P85298 464 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 KDSRQ06136 332 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 UBAP2LQ14157 1087 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 KCNA10Q16322 511 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 KHDC1Q4VXA5 237 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 CLEC14AQ86T13 490 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 RBM15BQ8NDT2 890 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 VPS39Q96JC1 886 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ZNF570Q96NI8 536 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 PPP1R2P1Q96PQ5 205 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 FCRL5Q96RD9 977 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 CAB39LQ9H9S4 337 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 MID2Q9UJV3 735 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 GABRQQ9UN88 632 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 NUP205Q92621 2012 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ITGB1P05556 798 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 F7P08709 466 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ALOX15P16050 662 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 AOC1P19801 751 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ABCG1P45844 678 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 RAP1GDS1P52306 607 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 CLNS1AP54105 237 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 TUBB3Q13509 450 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ANO4Q32M45 955 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 PCID2Q5JVF3 399 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 MANEALQ5VSG8 457 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 IL12RB2Q99665 862 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 GLOD4Q9HC38 313 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 PNPOQ9NVS9 261 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 SFMBT1Q9UHJ3 866 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 NOD1Q9Y239 953 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 ANKRD6Q9Y2G4 727 aa16.87■□□□□ 0.29
PRKCSH-217ENST00000592741 MATN3O15232 486 aa16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 MSI1O43347 362 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 H2AFYO75367 372 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 C2P06681 752 aa16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 GEMP55040 296 aa16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 MXRA7P84157 204 aa16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 IRF9Q00978 393 aa16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 YWHAHQ04917 246 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 PPP2R5DQ14738 602 aa16.86■□□□□ 0.29
PRKCSH-217ENST00000592741 TAF11Q15544 211 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms