RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 PKP1Q13835 747 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 RABGAP1LQ5R372 815 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 TTC39BQ5VTQ0 682 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 Q6ZVU0 165 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 PPM1KQ8N3J5 372 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 ATP6V0D2Q8N8Y2 350 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 MAPK15Q8TD08 544 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 TTC9Q92623 222 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 ERCC4Q92889 916 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 NT5C1BQ96P26 610 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 TSG101Q99816 390 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 FZD3Q9NPG1 666 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 ASCL3Q9NQ33 180 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 NLGN3Q9NZ94 848 aa20.18■□□□□ 0.82
PRKCSH-216ENST00000592445 ALOX15BO15296 676 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 ATP9BO43861 1147 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 SLC28A2O43868 658 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 AKT2P31751 481 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 TAS2R38P59533 333 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 DLG2Q15700 870 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 C3orf38Q5JPI3 329 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 KRBA2Q6ZNG9 492 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 OR13H1Q8NG92 308 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 RNF34Q969K3 372 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 USP29Q9HBJ7 922 aa20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 ARMCX3Q9UH62 379 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-216ENST00000592445 NAV2Q8IVL1 2488 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 TCAF2A6NFQ2 919 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 KCNU1A8MYU2 1149 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 ARHGAP6O43182 974 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 TRUB2O95900 331 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 GIMD1P0DJR0 217 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 HNRNPA2B1P22626 353 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 VASPP50552 380 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 CCDC15Q0P6D6 951 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 CXorf57Q6NSI4 855 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 NEK5Q6P3R8 708 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 BEND5Q7L4P6 421 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 IFI44Q8TCB0 444 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 SNRNP27Q8WVK2 155 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 SLC35C1Q96A29 364 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 MED8Q96G25 268 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 DUSP23Q9BVJ7 150 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 CAAP1Q9H8G2 361 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 DNAJC28Q9NX36 388 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 SATB2Q9UPW6 733 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 FARP1Q9Y4F1 1045 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 HECTD1Q9ULT8 2610 aa20.16■□□□□ 0.82
PRKCSH-216ENST00000592445 DOCK9Q9BZ29 2069 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 K7ESM1 405 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 KPNA3O00505 521 aaPredicted RBP20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 SCAMP1O15126 338 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 ACADSBP45954 432 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 CLDN2P57739 230 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 FKBP3Q00688 224 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 ISXQ2M1V0 245 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 ZNF284Q2VY69 593 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 ZNF542PQ5EBM4 170 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 PIP5KL1Q5T9C9 394 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 HORMAD1Q86X24 394 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 KAT5Q92993 513 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 RPRD1AQ96P16 312 aaPredicted RBP20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 PRMT1Q99873 361 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 FEM1AQ9BSK4 669 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 FAM204AQ9H8W3 233 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 POPDC2Q9HBU9 364 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 DYRK4Q9NR20 520 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 VPS28Q9UK41 221 aa20.15■□□□□ 0.82
PRKCSH-216ENST00000592445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 FAM237AA0A1B0GTK4 181 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 NEBLO76041 1014 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 PCDH8O95206 1070 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 PRCPP42785 496 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 GPD2P43304 727 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 FMO5P49326 533 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 YWHAZP63104 245 aaKnown RBP20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 CENPCQ03188 943 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 ZNF177Q13360 481 aaPredicted RBP20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 KIAA1614Q5VZ46 1190 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 Q6ZSR6 202 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 SH2D3CQ8N5H7 860 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 CCDC97Q96F63 343 aaPredicted RBP20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 IFT43Q96FT9 208 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 NOX5Q96PH1 765 aa20.14■□□□□ 0.81
PRKCSH-216ENST00000592445 SYNJ2BP-COX16A0A087WUM0 186 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 LY6G6EA0A0G2JKS1 128 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 WISP1O95388 367 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 IGLV3-25P01717 112 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 SLC2A3P11169 496 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 RPL34P49207 117 aaKnown RBP20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 HNRNPKP61978 463 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 ANKRD40Q6AI12 368 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 FBXL22Q6P050 247 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 FOXR1Q6PIV2 292 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 RRAGAQ7L523 313 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 PRICKLE2Q7Z3G6 844 aa20.13■□□□□ 0.81
PRKCSH-216ENST00000592445 PTAR1Q7Z6K3 402 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms