RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 TLE6Q9H808 572 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 SNX15Q9NRS6 342 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 ARL8BQ9NVJ2 186 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 PRG3Q9Y2Y8 225 aaPredicted RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 WASH4PA8MWX3 477 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 E9PAM4 449 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 AP3B1O00203 1094 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 MATN3O15232 486 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 TPH1P17752 444 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 DNAJB2P25686 324 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 SPRP35270 261 aaPredicted RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 SERPINB8P50452 374 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 RPL10AP62906 217 aaKnown RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 IRX4P78413 519 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 NOGQ13253 232 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 STX3Q13277 289 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 NFE2Q16621 373 aaPredicted RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 PPM1JQ5JR12 505 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 ZCCHC23Q6ZST2 131 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 LINC00523Q86TU6 105 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 KCNMB4Q86W47 210 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 ARID3BQ8IVW6 561 aaPredicted RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 NUP93Q8N1F7 819 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 RTL3Q8N8U3 475 aaKnown RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 SPATA22Q8NHS9 363 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 ATP2A3Q93084 1043 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 KIFC1Q9BW19 673 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 GLOD4Q9HC38 313 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 CHRAC1Q9NRG0 131 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 GREB1Q4ZG55 1949 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 A0A1W2PQ45 241 aaPredicted RBP16.05■□□□□ 0.16
MBD1-227ENST00000592060 A0A1W2PQY0 241 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 SYN3O14994 580 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 WFS1O76024 890 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 NMBRP28336 390 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 TYK2P29597 1187 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 MAGEA11P43364 429 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 RASSF2P50749 326 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 CSE1LP55060 971 aaKnown RBP16.05■□□□□ 0.16
MBD1-227ENST00000592060 DDR2Q16832 855 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 VARS2Q5ST30 1063 aaKnown RBP16.05■□□□□ 0.16
MBD1-227ENST00000592060 SWT1Q5T5J6 900 aaKnown RBP16.05■□□□□ 0.16
MBD1-227ENST00000592060 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 CCDC91Q7Z6B0 441 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 CMC1Q7Z7K0 106 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 MON1AQ86VX9 555 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 CRLF3Q8IUI8 442 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 ZNF683Q8IZ20 524 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 CD99L2Q8TCZ2 262 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 AZIN2Q96A70 460 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 TBL1YQ9BQ87 522 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 THAP1Q9NVV9 213 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 IL37Q9NZH6 218 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 TLR6Q9Y2C9 796 aa16.05■□□□□ 0.16
MBD1-227ENST00000592060 AAR2Q9Y312 384 aaKnown RBP16.05■□□□□ 0.16
MBD1-227ENST00000592060 FCHO1O14526 889 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 MOCS2O96007 188 aaPredicted RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 F7P08709 466 aaPredicted RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 PTPN4P29074 926 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 SLC8A1P32418 973 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 GMPRP36959 345 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 TUBP50607 506 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 USP46P62068 366 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 KRT72Q14CN4 511 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 HSP90AA5PQ58FG0 334 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 LHX8Q68G74 356 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 FSTL4Q6MZW2 842 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 TTC7BQ86TV6 843 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 C1orf74Q96LT6 269 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 TBC1D10AQ9BXI6 508 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 TMEM161AQ9NX61 479 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 TMEM216Q9P0N5 145 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 ANXA9O76027 345 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 MT-CYBP00156 380 aaPredicted RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 HLA-DQB2P05538 268 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 GRK4P32298 578 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 CSRP3P50461 194 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 MLLT6P55198 1093 aaPredicted RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 ZBTB16Q05516 673 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 MPP3Q13368 585 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 DENND5AQ6IQ26 1287 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 CLEC14AQ86T13 490 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 ALYREFQ86V81 257 aaKnown RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 TTC9BQ8N6N2 239 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 AGAP11Q8TF27 550 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 ZNF778Q96MU6 729 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 TUBB6Q9BUF5 446 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 FBXO44Q9H4M3 255 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 NOL6Q9H6R4 1146 aaKnown RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 C20orf96Q9NUD7 363 aaPredicted RBP16.04■□□□□ 0.16
MBD1-227ENST00000592060 MPP6Q9NZW5 540 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 GMIPQ9P107 970 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 PCDHB5Q9Y5E4 795 aa16.04■□□□□ 0.16
MBD1-227ENST00000592060 ITM2AO43736 263 aa16.03■□□□□ 0.16
MBD1-227ENST00000592060 COL6A1P12109 1028 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms