RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 UCNP55089 124 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 CENPCQ03188 943 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 DLG2Q15700 870 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 RRAGAQ7L523 313 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 OR13H1Q8NG92 308 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 OR52K2Q8NGK3 314 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 APOLD1Q96LR9 279 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 PRMT1Q99873 361 aaKnown RBP16.36■□□□□ 0.21
DDX39A-216ENST00000591275 PREBQ9HCU5 417 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 KLHL11Q9NVR0 708 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 SLC25A13Q9UJS0 675 aa16.36■□□□□ 0.21
DDX39A-216ENST00000591275 SYNJ2BP-COX16A0A087WUM0 186 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 A0A1W2PQU0 124 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 TCAF2A6NFQ2 919 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 KCNU1A8MYU2 1149 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 MCF2LO15068 1137 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 SART1O43290 800 aaKnown RBP16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ATP9BO43861 1147 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 PIAS2O75928 621 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ZNF202O95125 648 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 GPD2P43304 727 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 LSSP48449 732 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 IRAK1P51617 712 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 CLDN2P57739 230 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 KRT85P78386 507 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 FKBP3Q00688 224 aaKnown RBP16.35■□□□□ 0.21
DDX39A-216ENST00000591275 PNOCQ13519 176 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ZNF542PQ5EBM4 170 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 RABGAP1LQ5R372 815 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 PIP5KL1Q5T9C9 394 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 LSMEM2Q8N112 164 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ATP6V0D2Q8N8Y2 350 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 FAM181AQ8N9Y4 354 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ALG14Q96F25 216 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 ABCG4Q9H172 646 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 POLR1BQ9H9Y6 1135 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 COX16Q9P0S2 106 aa16.35■□□□□ 0.21
DDX39A-216ENST00000591275 LY6G6EA0A0G2JKS1 128 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 E5RJQ4 531 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 ALOX15BO15296 676 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 NEBLO76041 1014 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 DXOO77932 396 aaKnown RBP16.34■□□□□ 0.21
DDX39A-216ENST00000591275 IGLV3-25P01717 112 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 ALPPL2P10696 532 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 KRT10P13645 584 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 RPL34P49207 117 aaKnown RBP16.34■□□□□ 0.21
DDX39A-216ENST00000591275 ERVPABLB-1P60509 514 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 FBXL22Q6P050 247 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 BEND5Q7L4P6 421 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 ARHGEF19Q8IW93 802 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 WBP1Q96G27 269 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 VCPIP1Q96JH7 1222 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-216ENST00000591275 FEM1AQ9BSK4 669 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 FAM204AQ9H8W3 233 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 POPDC2Q9HBU9 364 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 ASCL3Q9NQ33 180 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 SLC12A6Q9UHW9 1150 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 VPS28Q9UK41 221 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 U3KQA8 63 aa16.34■□□□□ 0.21
DDX39A-216ENST00000591275 BOD1L1Q8NFC6 3051 aa16.33■□□□□ 0.21
DDX39A-216ENST00000591275 KPNA3O00505 521 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-216ENST00000591275 CTSLP07711 333 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 C6P13671 934 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 AKT2P31751 481 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 GGCXP38435 758 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 ACADSBP45954 432 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 OXCT1P55809 520 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 YWHAZP63104 245 aaKnown RBP16.33■□□□□ 0.2
DDX39A-216ENST00000591275 VAC14Q08AM6 782 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 TAF5Q15542 800 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 ZNF284Q2VY69 593 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 C3orf38Q5JPI3 329 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 TTC39BQ5VTQ0 682 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-216ENST00000591275 GCNT7Q6ZNI0 430 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 HORMAD1Q86X24 394 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 SLC22A18ASQ8N1D0 253 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 SH2D3CQ8N5H7 860 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 MAPK15Q8TD08 544 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 TTC9Q92623 222 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 RNF34Q969K3 372 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 ARRDC3Q96B67 414 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 TRIM62Q9BVG3 475 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 THSD1Q9NS62 852 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.33■□□□□ 0.27e-6■□□□□ 10.1
DDX39A-216ENST00000591275 DNAJC28Q9NX36 388 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 NLGN3Q9NZ94 848 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 SATB2Q9UPW6 733 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 KIF26BQ2KJY2 2108 aa16.33■□□□□ 0.2
DDX39A-216ENST00000591275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-216ENST00000591275 B8ZZF3 427 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 K7ESM1 405 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 RNF103O00237 685 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 PCDH8O95206 1070 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 MT-CO1P00395 513 aa16.32■□□□□ 0.2
DDX39A-216ENST00000591275 GP1BAP07359 652 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms