RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 UMODL1-AS1Q8N2C9 162 aa21.8■■□□□ 1.08
ATG4D-212ENST00000590096 KCTD6Q8NC69 237 aa21.8■■□□□ 1.08
ATG4D-212ENST00000590096 FBRSQ9HAH7 460 aa21.8■■□□□ 1.08
ATG4D-212ENST00000590096 PCDH18Q9HCL0 1135 aa21.8■■□□□ 1.08
ATG4D-212ENST00000590096 CD248Q9HCU0 757 aa21.8■■□□□ 1.08
ATG4D-212ENST00000590096 USP34Q70CQ2 3546 aa21.8■■□□□ 1.08
ATG4D-212ENST00000590096 ZFHX2Q9C0A1 2572 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-212ENST00000590096 BTNL10A8MVZ5 291 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 PJA2O43164 708 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 BUB1BO60566 1050 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-212ENST00000590096 LILRB5O75023 590 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 NDUFV2P19404 249 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 GLDCP23378 1020 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 NBL1P41271 181 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 DPYSQ14117 519 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 PDK2Q15119 407 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 PARP15Q460N3 678 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 ATP13A4Q4VNC1 1196 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 USP39Q53GS9 565 aaKnown RBP21.79■■□□□ 1.08
ATG4D-212ENST00000590096 SH2D3CQ8N5H7 860 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 ATP11CQ8NB49 1132 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 OR2T3Q8NH03 318 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 CSPG4P5Q96PW8 444 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 ACE2Q9BYF1 805 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-212ENST00000590096 PRSS16Q9NQE7 514 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 RCOR3Q9P2K3 495 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-212ENST00000590096 HS3ST2Q9Y278 367 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 CHD5Q8TDI0 1954 aa21.79■■□□□ 1.08
ATG4D-212ENST00000590096 TARSL2A2RTX5 802 aaKnown RBP21.78■■□□□ 1.08
ATG4D-212ENST00000590096 RASA4BC9J798 803 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 RASA4O43374 803 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 BUB1O43683 1085 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 ATP9BO43861 1147 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 COMTP21964 271 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 NDST2P52849 883 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 GEMIN4P57678 1058 aaKnown RBP21.78■■□□□ 1.08
ATG4D-212ENST00000590096 SLC20A2Q08357 652 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 KIF5AQ12840 1032 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 ODF2Q5BJF6 829 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 KIAA1324Q6UXG2 1013 aaKnown RBP21.78■■□□□ 1.08
ATG4D-212ENST00000590096 CALN1Q9BXU9 219 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 LACRTQ9GZZ8 138 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 MTG2Q9H4K7 406 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 NOL6Q9H6R4 1146 aaKnown RBP21.78■■□□□ 1.08
ATG4D-212ENST00000590096 PRDM16Q9HAZ2 1276 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 KLHL11Q9NVR0 708 aa21.78■■□□□ 1.08
ATG4D-212ENST00000590096 SIN3BO75182 1162 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 RPP40O75818 363 aaKnown RBP21.77■■□□□ 1.08
ATG4D-212ENST00000590096 ZMPSTE24O75844 475 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 SRCP12931 536 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 TNNT1P13805 278 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 AMPD1P23109 780 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 CLCN6P51797 869 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 COPAP53621 1224 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 BYSLQ13895 437 aaKnown RBP21.77■■□□□ 1.08
ATG4D-212ENST00000590096 DLG2Q15700 870 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 LRRC38Q5VT99 294 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 C11orf63Q6NUN7 778 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 TMCO3Q6UWJ1 677 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 LINGO4Q6UY18 593 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 CEP68Q76N32 757 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 DAAM2Q86T65 1068 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 TMPRSS6Q8IU80 811 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 RHOT1Q8IXI2 618 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 LZTR1Q8N653 840 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 TPCN2Q8NHX9 752 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 FAM71BQ8TC56 605 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 GAB3Q8WWW8 586 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 TSC1Q92574 1164 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 PRCCQ92733 491 aaPredicted RBP21.77■■□□□ 1.08
ATG4D-212ENST00000590096 SIPA1Q96FS4 1042 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 HMCESQ96FZ2 354 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 CELF6Q96J87 481 aaKnown RBP21.77■■□□□ 1.08
ATG4D-212ENST00000590096 SPACA7Q96KW9 195 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 MRGPRX1Q96LB2 322 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 ZNF670Q9BS34 389 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 MKRN2Q9H000 416 aaKnown RBP21.77■■□□□ 1.08
ATG4D-212ENST00000590096 SLC6A17Q9H1V8 727 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 SEMA4AQ9H3S1 761 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 HYOU1Q9Y4L1 999 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 ALG6Q9Y672 507 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 DUSP10Q9Y6W6 482 aa21.77■■□□□ 1.08
ATG4D-212ENST00000590096 EML5Q05BV3 1969 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 CXorf51AA0A1B0GTR3 108 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 ZSCAN5CA6NGD5 496 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-212ENST00000590096 ARHGAP42A6NI28 874 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 KDELR3O43731 214 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 RNASEH1O60930 286 aaKnown RBP21.76■■□□□ 1.07
ATG4D-212ENST00000590096 MT-CO1P00395 513 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 CD48P09326 243 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 ACADMP11310 421 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 PTPRZ1P23471 2315 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-212ENST00000590096 SERPINH1P50454 418 aaKnown RBP21.76■■□□□ 1.07
ATG4D-212ENST00000590096 ARSEP51690 589 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 ARF5P84085 180 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 DPYSL3Q14195 570 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 IFI16Q16666 785 aaKnown RBP21.76■■□□□ 1.07
ATG4D-212ENST00000590096 C9orf64Q5T6V5 341 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 FRS2Q8WU20 508 aa21.76■■□□□ 1.07
ATG4D-212ENST00000590096 LRRC19Q9H756 370 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms