RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	MUC3B	Q9H195	1237 aa		17.74	■□□□□ 0.43
MBD1-221	ENST00000589867	MFAP3L	O75121	409 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	LRCH4	O75427	683 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	IL1R2	P27930	398 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	MIP	P30301	263 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ACSL1	P33121	698 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	GALC	P54803	685 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ADK	P55263	362 aa	Known RBP	17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ARF5	P84085	180 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	GNA12	Q03113	381 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	GFPT1	Q06210	699 aa	Predicted RBP	17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ZNF33A	Q06730	810 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	MAPK8IP2	Q13387	824 aa	Predicted RBP	17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	TRIM14	Q14142	442 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	DLG2	Q15700	870 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	C6orf118	Q5T5N4	469 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ZNF776	Q68DI1	518 aa	Predicted RBP	17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	RWDD4	Q6NW29	188 aa	Known RBP	17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	LINGO4	Q6UY18	593 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ZNF783	Q6ZMS7	281 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	CYP2U1	Q7Z449	544 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	VOPP1	Q96AW1	172 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	BTBD6	Q96KE9	485 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	GPR174	Q9BXC1	333 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	PACSIN1	Q9BY11	444 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	PABPC3	Q9H361	631 aa	Known RBP	17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	VPS45	Q9NRW7	570 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ABHD10	Q9NUJ1	306 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	DNAI1	Q9UI46	699 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	PILRB	Q9UKJ0	227 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	SARDH	Q9UL12	918 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	PCDH15	Q96QU1	1955 aa		17.73	■□□□□ 0.43
MBD1-221	ENST00000589867	ATXN2	Q99700	1313 aa	Known RBP	17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	ASCC3	Q8N3C0	2202 aa	Known RBP	17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	DOCK9	Q9BZ29	2069 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	ANKRD62	A6NC57	917 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	MID1	O15344	667 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	AIF1	P55008	147 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	ZBTB16	Q05516	673 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	CST6	Q15828	149 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	EFHC2	Q5JST6	749 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	CCDC122	Q5T0U0	273 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	LYSMD4	Q5XG99	296 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867		Q6ZVU0	165 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	FAM124A	Q86V42	546 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	CPNE8	Q86YQ8	564 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	MMAA	Q8IVH4	418 aa	Known RBP	17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	AADAT	Q8N5Z0	425 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	PIGK	Q92643	395 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	ARHGEF2	Q92974	986 aa	Known RBP	17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	TRIM11	Q96F44	468 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	HSPA12B	Q96MM6	686 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	PPP1R9B	Q96SB3	815 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	KCTD15	Q96SI1	283 aa	Predicted RBP	17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	SNRNP25	Q9BV90	132 aa	Known RBP	17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	KLC2	Q9H0B6	622 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	DLL3	Q9NYJ7	618 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	PCSK1N	Q9UHG2	260 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	SLCO1B1	Q9Y6L6	691 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	SCIN	Q9Y6U3	715 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	ADAMTS9	Q9P2N4	1935 aa		17.72	■□□□□ 0.43
MBD1-221	ENST00000589867	SSU72P8	A0A1W2PR75	194 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	WASH4P	A8MWX3	477 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	CTSL	P07711	333 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	DRD3	P35462	400 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	MAPKAPK2	P49137	400 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	LMNB2	Q03252	620 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	SLC18A3	Q16572	532 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	RSPO4	Q2I0M5	234 aa	Predicted RBP	17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	TXNRD3NB	Q6F5E7	133 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	SYT12	Q8IV01	421 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	RTL3	Q8N8U3	475 aa	Known RBP	17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	DNASE2B	Q8WZ79	361 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	FAM131C	Q96AQ9	280 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	C2orf49	Q9BVC5	232 aa	Predicted RBP	17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	RETREG1	Q9H6L5	497 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	SLC25A13	Q9UJS0	675 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	AP4E1	Q9UPM8	1137 aa		17.71	■□□□□ 0.43
MBD1-221	ENST00000589867	LNP1	A1A4G5	178 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	METTL12	A8MUP2	240 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	CREB3	O43889	395 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	ACADM	P11310	421 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	MAOB	P27338	520 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	EPHB2	P29323	1055 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	OXTR	P30559	389 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	SLC8A1	P32418	973 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	KRT83	P78385	493 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	IRX4	P78413	519 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	ELAVL3	Q14576	367 aa	Known RBP	17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	ERMARD	Q5T6L9	678 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	VPS36	Q86VN1	386 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	NIPA2	Q8N8Q9	360 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	CADM4	Q8NFZ8	388 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	OR2A12	Q8NGT7	310 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	C1orf216	Q8TAB5	229 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	ORAI3	Q9BRQ5	295 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	SPON2	Q9BUD6	331 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	NUP85	Q9BW27	656 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	NEUROG2	Q9H2A3	272 aa		17.7	■□□□□ 0.42
MBD1-221	ENST00000589867	C6orf106	Q9H6K1	298 aa	Predicted RBP	17.7	■□□□□ 0.42

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