RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CTNND2Q9UQB3 1225 aa18.94■□□□□ 0.62
CCDC43-204ENST00000588687 I6L893 689 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-204ENST00000588687 RNF103O00237 685 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 MCF2LO15068 1137 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 THAP12O43422 761 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 MED7O43513 233 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 SDC3O75056 442 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 PRB1P04280 392 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 GLI1P08151 1106 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 GIMD1P0DJR0 217 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 CCR1P32246 355 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 AUHQ13825 339 aaKnown RBP18.93■□□□□ 0.62
CCDC43-204ENST00000588687 C5orf22Q49AR2 442 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 ARTNQ5T4W7 220 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 OLFML1Q6UWY5 402 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 DSG4Q86SJ6 1040 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 PRPF39Q86UA1 669 aaKnown RBP18.93■□□□□ 0.62
CCDC43-204ENST00000588687 SLC25A45Q8N413 288 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 SH2D3CQ8N5H7 860 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 PSMB7Q99436 277 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 PREBQ9HCU5 417 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 UBE2TQ9NPD8 197 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-204ENST00000588687 ANLNQ9NQW6 1124 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 HS3ST2Q9Y278 367 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 TBC1D30Q9Y2I9 924 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 RAI2Q9Y5P3 530 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 HS3ST4Q9Y661 456 aa18.93■□□□□ 0.62
CCDC43-204ENST00000588687 SIGLEC6O43699 453 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 BRINP1O60477 761 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 SLC2A3P11169 496 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 OXCT1P55809 520 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 NUCB2P80303 420 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 DLG2Q15700 870 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 FAM46CQ5VWP2 391 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 TRIM65Q6PJ69 517 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 C14orf80Q86SX3 495 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 ERICH1Q86X53 443 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 ZNF683Q8IZ20 524 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 RPRD1AQ96P16 312 aaPredicted RBP18.92■□□□□ 0.62
CCDC43-204ENST00000588687 SLC25A13Q9UJS0 675 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 VANGL2Q9ULK5 521 aa18.92■□□□□ 0.62
CCDC43-204ENST00000588687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.92■□□□□ 0.62
CCDC43-204ENST00000588687 BICDL2A1A5D9 508 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 PRAMEF26H0Y7S4 382 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 ATXN7O15265 892 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-204ENST00000588687 HSF2BPO75031 334 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 GNA14O95837 355 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 SRCP12931 536 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 CDK17Q00537 523 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 APBA1Q02410 837 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 ZNF211Q13398 564 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-204ENST00000588687 SETMARQ53H47 684 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-204ENST00000588687 FAM183BPQ6ZVS7 135 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 ENOSF1Q7L5Y1 443 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 UCKL1Q9NWZ5 548 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 HOOK1Q9UJC3 728 aaKnown RBP18.91■□□□□ 0.62
CCDC43-204ENST00000588687 PCDHGC3Q9UN70 934 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 AK5Q9Y6K8 562 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 DOCK4Q8N1I0 1966 aa18.91■□□□□ 0.62
CCDC43-204ENST00000588687 SYNJ2BP-COX16A0A087WUM0 186 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 C1QTNF3-AMACRE9PGA6 284 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 MAGEC1O60732 1142 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 PAGE1O75459 146 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 DAB1O75553 588 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 GRAP2O75791 330 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 MT-CO1P00395 513 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 ERBB2P04626 1255 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 PRLRP16471 622 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 STX17P56962 302 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 PAK1Q13153 545 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 ZNF284Q2VY69 593 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 PCSK4Q6UW60 755 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 SLC26A9Q7LBE3 791 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 PASD1Q8IV76 773 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 SLC22A18ASQ8N1D0 253 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 OR2A12Q8NGT7 310 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 OR4C6Q8NH72 309 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 SHC3Q92529 594 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 ARRDC3Q96B67 414 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 PPP1R13BQ96KQ4 1090 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 GPR27Q9NS67 375 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 COX16Q9P0S2 106 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 SLC12A6Q9UHW9 1150 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 VPS28Q9UK41 221 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 AJAP1Q9UKB5 411 aaPredicted RBP18.9■□□□□ 0.62
CCDC43-204ENST00000588687 CLCA2Q9UQC9 943 aa18.9■□□□□ 0.62
CCDC43-204ENST00000588687 LY6G6EA0A0G2JKS1 128 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 TK2O00142 265 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 SNAP91O60641 907 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 RNGTTO60942 597 aaKnown RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 CLDN11O75508 207 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 CNTN5O94779 1100 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 TFE3P19532 575 aaPredicted RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 GLDCP23378 1020 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 DGKAP23743 735 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 TLE3Q04726 772 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 STAT4Q14765 748 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 TBC1D25Q3MII6 688 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 ACCSLQ4AC99 568 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms