RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PSMB7Q99436 277 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 CHP1Q99653 195 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 SPON2Q9BUD6 331 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 NUP85Q9BW27 656 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ACE2Q9BYF1 805 aaPredicted RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 TRIM7Q9C029 511 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 SLC6A17Q9H1V8 727 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ARRDC1-AS1Q9H2J1 176 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ATP13A1Q9HD20 1204 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 VPS45Q9NRW7 570 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 SEMA4GQ9NTN9 838 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
TPM4-207ENST00000588032 PCSK1NQ9UHG2 260 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 VPS51Q9UID3 782 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 ANAPC7Q9UJX3 599 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 AP4E1Q9UPM8 1137 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 NCKAP1Q9Y2A7 1128 aa10.35□□□□□ -0.75
TPM4-207ENST00000588032 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ZSCAN5CA6NGD5 496 aaPredicted RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 PRR5-ARHGAP8B1AHC4 643 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 CBX4O00257 560 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 MCF2LO15068 1137 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ALOX15BO15296 676 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ZMPSTE24O75844 475 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ADH1BP00325 375 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 SRCP12931 536 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 C5AR1P21730 350 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 SDHBP21912 280 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 TGM1P22735 817 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 MPLP40238 635 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 DHPSP49366 369 aaPredicted RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 TPI1P60174 286 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ARHGAP8P85298 464 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 CREB5Q02930 508 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 LMNB2Q03252 620 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ZNF33AQ06730 810 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 DLG2Q15700 870 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 CST6Q15828 149 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 HADHQ16836 314 aaKnown RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 PARP15Q460N3 678 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 SYCP2LQ5T4T6 812 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 FAM46CQ5VWP2 391 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 LYSMD4Q5XG99 296 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 CYP2U1Q7Z449 544 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 RABEPKQ7Z6M1 372 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 SYT12Q8IV01 421 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 TMEFF1Q8IYR6 380 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 UMODL1-AS1Q8N2C9 162 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 TC2NQ8N9U0 490 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ATP11CQ8NB49 1132 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 OR7D4Q8NG98 312 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 TEKT4Q8WW24 435 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 OR8D1Q8WZ84 308 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 ARHGEF2Q92974 986 aaKnown RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 ERLEC1Q96DZ1 483 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 TOE1Q96GM8 510 aaKnown RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 SNRNP25Q9BV90 132 aaKnown RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 MAGEB5Q9BZ81 275 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 CEP44Q9C0F1 390 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 DHX35Q9H5Z1 703 aaKnown RBP10.34□□□□□ -0.75
TPM4-207ENST00000588032 ZWILCHQ9H900 591 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 SGK2Q9HBY8 427 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 CTTNBP2NLQ9P2B4 639 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 DNAI1Q9UI46 699 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 INTUQ9ULD6 942 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 NEU3Q9UQ49 428 aa10.34□□□□□ -0.75
TPM4-207ENST00000588032 METTL12A8MUP2 240 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 EEF2KO00418 725 aaKnown RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 DAPK3O43293 454 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 KDELR3O43731 214 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 SNAP91O60641 907 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 MT-CO1P00395 513 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 SLC8A1P32418 973 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 RECQLP46063 649 aaPredicted RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 SERPINH1P50454 418 aaKnown RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 NDST2P52849 883 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 CCDC15Q0P6D6 951 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 WDR45BQ5MNZ6 344 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 MMAAQ8IVH4 418 aaKnown RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 RHOT2Q8IXI1 618 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 KIAA2013Q8IYS2 634 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 CCDC170Q8IYT3 715 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 STK40Q8N2I9 435 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 LZTR1Q8N653 840 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 CEP76Q8TAP6 659 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 ZNF564Q8TBZ8 553 aaPredicted RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 CASKIN2Q8WXE0 1202 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 ISG20Q96AZ6 181 aaKnown RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 ARHGEF26Q96DR7 871 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 PANX2Q96RD6 677 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 OMDQ99983 421 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 BTBD1Q9H0C5 482 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 MTG2Q9H4K7 406 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 NDFIP2Q9NV92 336 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms