RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 A0A1B0GTQ1 180 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 A0A1W2PR77 199 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 F8VZ95 297 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 TAF4O00268 1085 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 PCDHGA12O60330 932 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 RHOCP08134 193 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 ZNF18P17022 549 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 CD38P28907 300 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 MAT2AP31153 395 aaKnown RBP14.72□□□□□ -0.05
VMP1-206ENST00000587945 GRK6P43250 576 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
VMP1-206ENST00000587945 CNTN1Q12860 1018 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 SHBQ15464 509 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 SLC25A52Q3SY17 297 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 NAA35Q5VZE5 725 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 PHLDB2Q86SQ0 1253 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 PIP4K2CQ8TBX8 421 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 SLC20A1Q8WUM9 679 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 PGAP3Q96FM1 320 aaPredicted RBP14.72□□□□□ -0.05
VMP1-206ENST00000587945 ELF4Q99607 663 aaPredicted RBP14.72□□□□□ -0.05
VMP1-206ENST00000587945 STK33Q9BYT3 514 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 VPS16Q9H269 839 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 PPM1HQ9ULR3 514 aa14.72□□□□□ -0.05
VMP1-206ENST00000587945 A0A0D9SEW6 157 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 DRGXA6NNA5 263 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 SMAD6O43541 496 aaKnown RBP14.71□□□□□ -0.05
VMP1-206ENST00000587945 SRGAP2O75044 1071 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 DKK1O94907 266 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 CAPNS1P04632 268 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 SRCP12931 536 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 RRM1P23921 792 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 NOMO3P69849 1222 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 ARTNQ5T4W7 220 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 AGBL4Q5VU57 503 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 FAM46CQ5VWP2 391 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 LINGO4Q6UY18 593 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 DSG4Q86SJ6 1040 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 FAM131BQ86XD5 332 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 ATP11CQ8NB49 1132 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 FAM131CQ96AQ9 280 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 SKA1Q96BD8 255 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 CFAP57Q96MR6 1250 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 GANQ9H2C0 597 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 ARHGAP20Q9P2F6 1191 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 VPS51Q9UID3 782 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 TMEM59LQ9UK28 342 aa14.71□□□□□ -0.05
VMP1-206ENST00000587945 E9PAM4 449 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 C1QTNF3-AMACRE9PGA6 284 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 TLR4O00206 839 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 RNF103O00237 685 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 CBX4O00257 560 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 MCF2LO15068 1137 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 ZZEF1O43149 2961 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 TNFSF14O43557 240 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 LATO43561 262 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 PLRG1O43660 514 aaKnown RBP14.7□□□□□ -0.06
VMP1-206ENST00000587945 GFPT2O94808 682 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 LSM8O95777 96 aaKnown RBP14.7□□□□□ -0.06
VMP1-206ENST00000587945 F9P00740 461 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 CTSLP07711 333 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 GLDCP23378 1020 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 EEF1GP26641 437 aaKnown RBP14.7□□□□□ -0.06
VMP1-206ENST00000587945 SCNN1AP37088 669 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 NXPH1P58417 271 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 KRT83P78385 493 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 RAB6CQ53S08 254 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 LRRC31Q6UY01 552 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 PRPF39Q86UA1 669 aaKnown RBP14.7□□□□□ -0.06
VMP1-206ENST00000587945 EMC1Q8N766 993 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 CHST14Q8NCH0 376 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 OR7D4Q8NG98 312 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 C1orf74Q96LT6 269 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 RAB6CQ9H0N0 254 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 GDF3Q9NR23 364 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 HS3ST2Q9Y278 367 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 CA5BQ9Y2D0 317 aa14.7□□□□□ -0.06
VMP1-206ENST00000587945 FAM149AA5PLN7 773 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 EPHB6O15197 1021 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 SLC7A4O43246 635 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 DFNA5O60443 496 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 ENDOD1O94919 500 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 GJB6O95452 261 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 ITGAVP06756 1048 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 CHRNB2P17787 502 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 TAS2R38P59533 333 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 POLR2FP61218 127 aaKnown RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 ATP11AP98196 1134 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 KRT31Q15323 416 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 CT47A1Q5JQC4 288 aaPredicted RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 NAPEPLDQ6IQ20 393 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 TMPRSS7Q7RTY8 843 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 BNIPLQ7Z465 357 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 OR2A12Q8NGT7 310 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 MDM1Q8TC05 714 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 ENOX1Q8TC92 643 aaKnown RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 SAP25Q8TEE9 199 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 KLK6Q92876 244 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms