RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 SETD3Q86TU7 594 aaPredicted RBP16.32■□□□□ 0.2
GHDC-207ENST00000587427 TDRD5Q8NAT2 981 aaKnown RBP16.32■□□□□ 0.2
GHDC-207ENST00000587427 RNF149Q8NC42 400 aa16.32■□□□□ 0.2
GHDC-207ENST00000587427 DIS3LQ8TF46 1054 aaKnown RBP16.32■□□□□ 0.2
GHDC-207ENST00000587427 PPP1R14BQ96C90 147 aa16.32■□□□□ 0.2
GHDC-207ENST00000587427 SPATA13Q96N96 652 aa16.32■□□□□ 0.2
GHDC-207ENST00000587427 CPNE1Q99829 537 aa16.32■□□□□ 0.2
GHDC-207ENST00000587427 INO80BQ9C086 356 aaPredicted RBP16.32■□□□□ 0.2
GHDC-207ENST00000587427 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
GHDC-207ENST00000587427 LIN28AQ9H9Z2 209 aaKnown RBP16.32■□□□□ 0.2
GHDC-207ENST00000587427 TXNDC16Q9P2K2 825 aa16.32■□□□□ 0.2
GHDC-207ENST00000587427 CEPT1Q9Y6K0 416 aa16.32■□□□□ 0.2
GHDC-207ENST00000587427 CFLARO15519 480 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 ATP6V1G1O75348 118 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 DGKIO75912 1065 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 NFICP08651 508 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 CXCL8P10145 99 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 P4HA1P13674 534 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 HOXD10P28358 340 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 STXBP2Q15833 593 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 HACE1Q8IYU2 909 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 CPSF7Q8N684 471 aaKnown RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 CXorf38Q8TB03 319 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 RIN3Q8TB24 985 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 SREK1Q8WXA9 508 aaKnown RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 USP13Q92995 863 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 GFM2Q969S9 779 aaKnown RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 HSPBAP1Q96EW2 488 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 PKP2Q99959 881 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 ACSS2Q9NR19 701 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 KIAA1257Q9ULG3 409 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 KPNA7A9QM74 516 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 G3V2L1 256 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 BCAS2O75934 225 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 HNRNPCP07910 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
GHDC-207ENST00000587427 F7P08709 466 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 ADSLP30566 484 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 SERPINB8P50452 374 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 STAT5BP51692 787 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 SESN2P58004 480 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 PPIDQ08752 370 aaKnown RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 FAM160B1Q5W0V3 765 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 PGAM4Q8N0Y7 254 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 TRPV1Q8NER1 839 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 DNERQ8NFT8 737 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 HTR3CQ8WXA8 447 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 STON2Q8WXE9 905 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 KHSRPQ92945 711 aaKnown RBP eCLIP16.31■□□□□ 0.2
GHDC-207ENST00000587427 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 MAF1Q9H063 256 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 TSPAN16Q9UKR8 245 aa16.31■□□□□ 0.2
GHDC-207ENST00000587427 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
GHDC-207ENST00000587427 HACD1B0YJ81 288 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 ACKR2O00590 384 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 ITGB3P05106 788 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 CEACAM7Q14002 265 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 HERC3Q15034 1050 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 CYTH1Q15438 398 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 NUP93Q8N1F7 819 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 BHLHE22Q8NFJ8 381 aaPredicted RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 AFG1LQ8WV93 481 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 MAGEB5Q9BZ81 275 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 WDR55Q9H6Y2 383 aaPredicted RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 GTF2IRD1Q9UHL9 959 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 H0YJX3 145 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 STX16-NPEPL1H3BU86 382 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 MATN2O00339 956 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 TRIM13O60858 407 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 AMHP03971 560 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 EDNRBP24530 442 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 HK2P52789 917 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 SLC6A3Q01959 620 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 CTU1Q7Z7A3 348 aaKnown RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 CMC1Q7Z7K0 106 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 PLD6Q8N2A8 252 aaKnown RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 DCLK2Q8N568 766 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 TMEM102Q8N9M5 508 aaPredicted RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 GRIN3AQ8TCU5 1115 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 HAUS8Q9BT25 410 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 ILKAPQ9H0C8 392 aaPredicted RBP16.3■□□□□ 0.2
GHDC-207ENST00000587427 CDT1Q9H211 546 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 ZNF385DQ9H6B1 395 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 DTLQ9NZJ0 730 aa16.3■□□□□ 0.2
GHDC-207ENST00000587427 NOP56O00567 594 aaKnown RBP16.29■□□□□ 0.2
GHDC-207ENST00000587427 GAS2O43903 313 aaKnown RBP16.29■□□□□ 0.2
GHDC-207ENST00000587427 FAM163BP0C2L3 166 aa16.29■□□□□ 0.2
GHDC-207ENST00000587427 ERVK-10P10266 1014 aa16.29■□□□□ 0.2
GHDC-207ENST00000587427 NELFEP18615 380 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms