RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DMAP1Q9NPF5 467 aaPredicted RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 CYLDQ9NQC7 956 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.1□□□□□ -1.11
VMP1-204ENST00000587259 HESX1Q9UBX0 185 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 CLEC4EQ9ULY5 219 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.1□□□□□ -1.11
VMP1-204ENST00000587259 BTBD3Q9Y2F9 522 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
VMP1-204ENST00000587259 PCDHB9Q9Y5E1 797 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 ALG6Q9Y672 507 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 APC2O95996 2303 aa8.1□□□□□ -1.11
VMP1-204ENST00000587259 A0A1W2PQH9 124 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 FAM221BA6H8Z2 402 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 MEI4A8MW99 385 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 ZNF185O15231 689 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 CACNG3O60359 315 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 CBFA2T3O75081 653 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 PROSCO94903 275 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 PRB1P04280 392 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 ATXN1LP0C7T5 689 aaKnown RBP8.09□□□□□ -1.11
VMP1-204ENST00000587259 RRM1P23921 792 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 BRD2P25440 801 aaKnown RBP8.09□□□□□ -1.11
VMP1-204ENST00000587259 CXCR5P32302 372 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 IL12RB1P42701 662 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 DGKGP49619 791 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 NDST1P52848 882 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 RAD23BP54727 409 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 MESDQ14696 234 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 GEN1Q17RS7 908 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 ZNF423Q2M1K9 1284 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 SPDYCQ5MJ68 293 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 DCUN1D2Q6PH85 259 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 FBXO38Q6PIJ6 1188 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 CCNI2Q6ZMN8 369 aaPredicted RBP8.09□□□□□ -1.11
VMP1-204ENST00000587259 HTR3DQ70Z44 454 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 TRMT11Q7Z4G4 463 aaKnown RBP8.09□□□□□ -1.11
VMP1-204ENST00000587259 RHOT1Q8IXI2 618 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 IFT20Q8IY31 132 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 ZNF366Q8N895 744 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 NIPA2Q8N8Q9 360 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 ADAMTS14Q8WXS8 1223 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 SMARCD1Q96GM5 515 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 ZNF419Q96HQ0 510 aaPredicted RBP8.09□□□□□ -1.11
VMP1-204ENST00000587259 LRIG1Q96JA1 1093 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 CEP295NLQ96MC4 621 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 GABRG3Q99928 467 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 C11orf70Q9BRQ4 267 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 PARD6BQ9BYG5 372 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 HOMER3Q9NSC5 361 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 TOR4AQ9NXH8 423 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 IL37Q9NZH6 218 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 EHD2Q9NZN4 543 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 STIM2Q9P246 746 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 RASAL2Q9UJF2 1139 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 PCDHA3Q9Y5H8 950 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 STON1Q9Y6Q2 735 aa8.09□□□□□ -1.11
VMP1-204ENST00000587259 GCN1Q92616 2671 aaKnown RBP8.09□□□□□ -1.11
VMP1-204ENST00000587259 A0A1B0GVT2 93 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 HHLA1C9JL84 531 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 M0QYV0 167 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 O00370 1275 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 KRIT1O00522 736 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 DDX3YO15523 660 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 RRP9O43818 475 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 ZNF217O75362 1048 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 KLKB1P03952 638 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SYPP08247 313 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 RHOXF2BP0C7M4 288 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 NCAM1P13591 858 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 HLA-EP13747 358 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 COMTP21964 271 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 PRKCHP24723 683 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 CD6P30203 668 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 HOXD12P35452 270 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SCNN1AP37088 669 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 CSNK1EP49674 416 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 COPS2P61201 443 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 IL9RQ01113 521 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 MAMLD1Q13495 774 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 CUL1Q13616 776 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 DHX34Q14147 1143 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 ODF2Q5BJF6 829 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 KCNT1Q5JUK3 1230 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 C10orf120Q5SQS8 335 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 LRRC38Q5VT99 294 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 DCAF12L1Q5VU92 463 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SNX30Q5VWJ9 437 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 ARHGAP17Q68EM7 881 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SDE2Q6IQ49 451 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 LCLAT1Q6UWP7 414 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 MMS22LQ6ZRQ5 1243 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SCD5Q86SK9 330 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 PASD1Q8IV76 773 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SLC4A11Q8NBS3 891 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms