RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 COX16Q9P0S2 106 aa16.79■□□□□ 0.28
NPC1-205ENST00000587163 SLC12A6Q9UHW9 1150 aa16.79■□□□□ 0.28
NPC1-205ENST00000587163 RNF103O00237 685 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 SLC31A1O15431 190 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 BNIP3LO60238 219 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 RNGTTO60942 597 aaKnown RBP16.78■□□□□ 0.28
NPC1-205ENST00000587163 LETM1O95202 739 aaPredicted RBP16.78■□□□□ 0.28
NPC1-205ENST00000587163 SMC2O95347 1197 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 GIMD1P0DJR0 217 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 MYF5P13349 255 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 KRT5P13647 590 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 PLA2G2AP14555 144 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 PRLRP16471 622 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 E2F1Q01094 437 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 CETN1Q12798 172 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
NPC1-205ENST00000587163 SETMARQ53H47 684 aaPredicted RBP16.78■□□□□ 0.28
NPC1-205ENST00000587163 RABGAP1LQ5R372 815 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 TTI2Q6NXR4 508 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 TMEM145Q8NBT3 493 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 OR4C6Q8NH72 309 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 DHTKD1Q96HY7 919 aaPredicted RBP16.78■□□□□ 0.28
NPC1-205ENST00000587163 MED15Q96RN5 788 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
NPC1-205ENST00000587163 TEX51A0A1B0GUA7 166 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 PSMA7O14818 248 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 FFAR2O15552 330 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 MT-CO1P00395 513 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 CTSLP07711 333 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 THEGLP0DJG4 465 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 ZNF18P17022 549 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 GGCXP38435 758 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 CXADRP78310 365 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 KCNH2Q12809 1159 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 PIP5KL1Q5T9C9 394 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 TTC39BQ5VTQ0 682 aaPredicted RBP16.77■□□□□ 0.28
NPC1-205ENST00000587163 CDCP2Q5VXM1 449 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 TMC6Q7Z403 805 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 C14orf80Q86SX3 495 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 DEFB106AQ8N104 65 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 SH2D3CQ8N5H7 860 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
NPC1-205ENST00000587163 RPRD1AQ96P16 312 aaPredicted RBP16.77■□□□□ 0.28
NPC1-205ENST00000587163 SLC2A13Q96QE2 648 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 INTS2Q9H0H0 1204 aaKnown RBP16.77■□□□□ 0.28
NPC1-205ENST00000587163 FAM204AQ9H8W3 233 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 PREBQ9HCU5 417 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 FZD3Q9NPG1 666 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 KLHL11Q9NVR0 708 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 DDIT4Q9NX09 232 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 SLC25A13Q9UJS0 675 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 VANGL2Q9ULK5 521 aa16.77■□□□□ 0.28
NPC1-205ENST00000587163 TENM4Q6N022 2769 aa16.77■□□□□ 0.27
NPC1-205ENST00000587163 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 TDRD6O60522 2096 aaKnown RBP16.76■□□□□ 0.27
NPC1-205ENST00000587163 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.76■□□□□ 0.27
NPC1-205ENST00000587163 A0A1W2PQU0 124 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 ALOX15BO15296 676 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 GRAP2O75791 330 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 CCR1P32246 355 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 OXCT1P55809 520 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 DAB2P98082 770 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 CDK17Q00537 523 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 ZNF177Q13360 481 aaPredicted RBP16.76■□□□□ 0.27
NPC1-205ENST00000587163 PDCLQ13371 301 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 MEA1Q16626 185 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 ZNF284Q2VY69 593 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 ZNF605Q86T29 641 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 WDTC1Q8N5D0 677 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 OR13H1Q8NG92 308 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 RNF34Q969K3 372 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 ARRDC3Q96B67 414 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
NPC1-205ENST00000587163 UBE2TQ9NPD8 197 aaPredicted RBP16.76■□□□□ 0.27
NPC1-205ENST00000587163 VPS28Q9UK41 221 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 HS3ST4Q9Y661 456 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 ATMQ13315 3056 aa16.76■□□□□ 0.27
NPC1-205ENST00000587163 PPP1R3GB7ZBB8 358 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 K7ERQ8 282 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 THAP12O43422 761 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 MED7O43513 233 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 OPA1O60313 960 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 PIAS2O75928 621 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 MPOP05164 745 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 SLC2A3P11169 496 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 CKMT1AP12532 417 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 SRCP12931 536 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 BMP6P22004 513 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 CLDN2P57739 230 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 STIM1Q13586 685 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 KLHL10Q6JEL2 608 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 HIC2Q96JB3 615 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 PPP1R9BQ96SB3 815 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 CPXM1Q96SM3 734 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 PSMB7Q99436 277 aa16.75■□□□□ 0.27
NPC1-205ENST00000587163 LGMNQ99538 433 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms