RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
CLPTM1-204ENST00000585961 ENOSF1Q7L5Y1 443 aa20.66■□□□□ 0.9
CLPTM1-204ENST00000585961 MUC3BQ9H195 1237 aa20.66■□□□□ 0.9
CLPTM1-204ENST00000585961 MCF2LO15068 1137 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 YKT6O15498 198 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 TLX3O43711 291 aaPredicted RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 SNAP91O60641 907 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 RNGTTO60942 597 aaKnown RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 FGFR1OPO95684 399 aaKnown RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 ERBB2P04626 1255 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 PRLRP16471 622 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 CKMT2P17540 419 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 TFE3P19532 575 aaPredicted RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 EIF2S3P41091 472 aaKnown RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 TTC39BQ5VTQ0 682 aaPredicted RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 AGBL4Q5VU57 503 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 FBXL19Q6PCT2 694 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 FOXR2Q6PJQ5 311 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 KANSL1Q7Z3B3 1105 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 KLHDC7BQ96G42 594 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 PPP1R9BQ96SB3 815 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 KDM4CQ9H3R0 1056 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 AJAP1Q9UKB5 411 aaPredicted RBP20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 RAI2Q9Y5P3 530 aa20.65■□□□□ 0.9
CLPTM1-204ENST00000585961 IGSF10Q6WRI0 2623 aa20.64■□□□□ 0.9
CLPTM1-204ENST00000585961 C1QTNF3-AMACRE9PGA6 284 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 RNF103O00237 685 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 TRIM38O00635 465 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 HSF2BPO75031 334 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 ENDOD1O94919 500 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 ADCY5O95622 1261 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 CTSLP07711 333 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 GLI1P08151 1106 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 PNMA6AP0CW24 399 aaPredicted RBP20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 KRT9P35527 623 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 TAS2R38P59533 333 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 MEA1Q16626 185 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 GBP6Q6ZN66 633 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 SLC25A45Q8N413 288 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 SH2D3CQ8N5H7 860 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 ATP11CQ8NB49 1132 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 C1orf131Q8NDD1 294 aaKnown RBP20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 FZD3Q9NPG1 666 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 ANLNQ9NQW6 1124 aa20.64■□□□□ 0.89
CLPTM1-204ENST00000585961 SMG1Q96Q15 3661 aaKnown RBP20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 A0A1W2PQU0 124 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 E9PAM4 449 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 PRAMEF26H0Y7S4 382 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 FOXN3O00409 490 aaPredicted RBP20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 SLC7A4O43246 635 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 SIGLEC6O43699 453 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 MYF5P13349 255 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 RRM1P23921 792 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 PON1P27169 355 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 ABCG1P45844 678 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 SLC6A3Q01959 620 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 PTK2Q05397 1052 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 CAMK4Q16566 473 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 EXOC3L4Q17RC7 722 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 ALFQ53S48 1182 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 SFMBT2Q5VUG0 894 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 LINGO4Q6UY18 593 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 TRIM69Q86WT6 500 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 OXR1Q8N573 874 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 NXPE2Q96DL1 559 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 PSMB7Q99436 277 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 TKTL2Q9H0I9 626 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 WDCPQ9H6R7 721 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 SYNCQ9H7C4 482 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 TMPRSS4Q9NRS4 437 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 ASNSD1Q9NWL6 643 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 UCKL1Q9NWZ5 548 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 APEX2Q9UBZ4 518 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 TPX2Q9ULW0 747 aaKnown RBP20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 DMTF1Q9Y222 760 aa20.63■□□□□ 0.89
CLPTM1-204ENST00000585961 KPNA3O00505 521 aaPredicted RBP20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 SMAD6O43541 496 aaKnown RBP20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 MAGEC1O60732 1142 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 CLDN11O75508 207 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 PRB1P04280 392 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 CDK4P11802 303 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 SRCP12931 536 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 GLDCP23378 1020 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 CHRNA3P32297 505 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 NOS2P35228 1153 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 CLDN2P57739 230 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 BECN1Q14457 450 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 SETMARQ53H47 684 aaPredicted RBP20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 ARSIQ5FYB1 569 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 OLFML1Q6UWY5 402 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 LRRC69Q6ZNQ3 347 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 SLC47A2Q86VL8 602 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 IQCHQ86VS3 1027 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 CHST14Q8NCH0 376 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 FAM131CQ96AQ9 280 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 ARRDC3Q96B67 414 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 TNKS2Q9H2K2 1166 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 PIGVQ9NUD9 493 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 PCDHGC3Q9UN70 934 aa20.62■□□□□ 0.89
CLPTM1-204ENST00000585961 TBC1D30Q9Y2I9 924 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms