RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RNGTTO60942 597 aaKnown RBP14.87□□□□□ -0.03
SDF2-202ENST00000585428 IRAK1P51617 712 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 INSM1Q01101 510 aaPredicted RBP14.87□□□□□ -0.03
SDF2-202ENST00000585428 ZNF177Q13360 481 aaPredicted RBP14.87□□□□□ -0.03
SDF2-202ENST00000585428 PDCLQ13371 301 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 MORC3Q14149 939 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 EFHC1Q5JVL4 640 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 ENOSF1Q7L5Y1 443 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 SH2D3CQ8N5H7 860 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 DCBLD1Q8N8Z6 715 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 TMEM145Q8NBT3 493 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 LSM14AQ8ND56 463 aaKnown RBP14.87□□□□□ -0.03
SDF2-202ENST00000585428 SNIP1Q8TAD8 396 aaKnown RBP14.87□□□□□ -0.03
SDF2-202ENST00000585428 FGF11Q92914 225 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 KLHDC7BQ96G42 594 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 CPXM1Q96SM3 734 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 SRRTQ9BXP5 876 aaKnown RBP14.87□□□□□ -0.03
SDF2-202ENST00000585428 PREBQ9HCU5 417 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 DDIT4Q9NX09 232 aa14.87□□□□□ -0.03
SDF2-202ENST00000585428 ASXL3Q9C0F0 2248 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 RRP8O43159 456 aaKnown RBP14.86□□□□□ -0.03
SDF2-202ENST00000585428 THAP12O43422 761 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 SIGLEC6O43699 453 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 MT-CO1P00395 513 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 GLDCP23378 1020 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 DGKAP23743 735 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 GNA15P30679 374 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 E2F1Q01094 437 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 CENPCQ03188 943 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 MTA1Q13330 715 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 NEK5Q6P3R8 708 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 LRRC69Q6ZNQ3 347 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 C14orf80Q86SX3 495 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 RNF34Q969K3 372 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 PPP1R13BQ96KQ4 1090 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 RPRD1AQ96P16 312 aaPredicted RBP14.86□□□□□ -0.03
SDF2-202ENST00000585428 KLHL11Q9NVR0 708 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 SLC25A13Q9UJS0 675 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 CLCA2Q9UQC9 943 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 HS3ST2Q9Y278 367 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 CA5BQ9Y2D0 317 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 HS3ST4Q9Y661 456 aa14.86□□□□□ -0.03
SDF2-202ENST00000585428 C1QTNF3-AMACRE9PGA6 284 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 ATXN7O15265 892 aaPredicted RBP14.85□□□□□ -0.03
SDF2-202ENST00000585428 HSF2BPO75031 334 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 SDC3O75056 442 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 CLDN11O75508 207 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 CTSLP07711 333 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 GIMD1P0DJR0 217 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 ZNF18P17022 549 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 STX17P56962 302 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 C19orf57Q0VDD7 668 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 KCNMA1Q12791 1236 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 ZNF284Q2VY69 593 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 POM121L1PQ3SYA9 428 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 SETMARQ53H47 684 aaPredicted RBP14.85□□□□□ -0.03
SDF2-202ENST00000585428 ARTNQ5T4W7 220 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 PIP5KL1Q5T9C9 394 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 SMYD5Q6GMV2 418 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 GJB7Q6PEY0 223 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 TRIM65Q6PJ69 517 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 Q6ZVU0 165 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 TMIEQ8NEW7 156 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 OR2A12Q8NGT7 310 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 SLC39A7Q92504 469 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 PSMB7Q99436 277 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 FAM204AQ9H8W3 233 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 VPS28Q9UK41 221 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 VANGL2Q9ULK5 521 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 PCDHGC3Q9UN70 934 aa14.85□□□□□ -0.03
SDF2-202ENST00000585428 SYNJ2BP-COX16A0A087WUM0 186 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 RNF103O00237 685 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 SLC31A1O15431 190 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 BRINP1O60477 761 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 PAGE1O75459 146 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 GRAP2O75791 330 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 C1QL1O75973 258 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 MT-CO3P00414 261 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 PRB1P04280 392 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 SRCP12931 536 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 SLC9A1P19634 815 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 CHRNA3P32297 505 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 CDH4P55283 916 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 OLFML1Q6UWY5 402 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 C11orf57Q6ZUT1 292 aaPredicted RBP14.84□□□□□ -0.03
SDF2-202ENST00000585428 ZNF683Q8IZ20 524 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 OR4C6Q8NH72 309 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 BAP1Q92560 729 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 FAM81BQ96LP2 452 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 ANLNQ9NQW6 1124 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 UCKL1Q9NWZ5 548 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 COX16Q9P0S2 106 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 CTNND2Q9UQB3 1225 aa14.84□□□□□ -0.03
SDF2-202ENST00000585428 A0A1W2PQU0 124 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 DRGXA6NNA5 263 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 I6L893 689 aaPredicted RBP14.83□□□□□ -0.04
SDF2-202ENST00000585428 K7ERQ8 282 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 CNTN5O94779 1100 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 THEGLP0DJG4 465 aa14.83□□□□□ -0.04
SDF2-202ENST00000585428 CKMT1AP12532 417 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms