RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 MAP3K6O95382 1288 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 IRAK1P51617 712 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 SATB1Q01826 763 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 GBE1Q04446 702 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 SNX1Q13596 522 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 GEN1Q17RS7 908 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 PREPLQ4J6C6 727 aaPredicted RBP17.12■□□□□ 0.33
GCDH-203ENST00000585420 ARTNQ5T4W7 220 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 TFAP2DQ7Z6R9 452 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 CIR1Q86X95 450 aaPredicted RBP17.12■□□□□ 0.33
GCDH-203ENST00000585420 WFDC5Q8TCV5 224 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 PRRX2Q99811 253 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 IER2Q9BTL4 223 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 DDX47Q9H0S4 455 aaKnown RBP17.12■□□□□ 0.33
GCDH-203ENST00000585420 HOMER3Q9NSC5 361 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 HCN2Q9UL51 889 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 ATG2BQ96BY7 2078 aa17.12■□□□□ 0.33
GCDH-203ENST00000585420 DRGXA6NNA5 263 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 MFSD11O43934 449 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 PHF2O75151 1096 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 CNTN5O94779 1100 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 CHRM1P11229 460 aaPredicted RBP17.11■□□□□ 0.33
GCDH-203ENST00000585420 RHOQP17081 205 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 HLA-FP30511 346 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 SERPINB6P35237 376 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 TIE1P35590 1138 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 TNFRSF4P43489 277 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 KIR2DL1P43626 348 aaPredicted RBP17.11■□□□□ 0.33
GCDH-203ENST00000585420 ALFQ53S48 1182 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 MPP7Q5T2T1 576 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 RNF43Q68DV7 783 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 TSSK4Q6SA08 328 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 RTL3Q8N8U3 475 aaKnown RBP17.11■□□□□ 0.33
GCDH-203ENST00000585420 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 KRT12Q99456 494 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 KCNH6Q9H252 994 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 SLC27A6Q9Y2P4 619 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 CACNA1IQ9P0X4 2223 aa17.11■□□□□ 0.33
GCDH-203ENST00000585420 TYW5A2RUC4 315 aaKnown RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 CHURC1-FNTBB4DL54 471 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 NR2C2P49116 596 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 PAFAH1B3Q15102 231 aaKnown RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 CCNG2Q16589 344 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CCDC33Q8N5R6 958 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 NPWQ8N729 165 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 NOA1Q8NC60 698 aaKnown RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 HJURPQ8NCD3 748 aaPredicted RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 SLC2A11Q9BYW1 496 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 LRRC19Q9H756 370 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 DTLQ9NZJ0 730 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 STARD13Q9Y3M8 1113 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 MCF2LO15068 1137 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 LIASO43766 372 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CHRNA3P32297 505 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CXCL12P48061 93 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CCR3P51677 355 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 EIF3EP60228 445 aaKnown RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 NOMO1Q15155 1222 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 C5orf22Q49AR2 442 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 TMEM215Q68D42 235 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CCDC137Q6PK04 289 aaKnown RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 NUDT18Q6ZVK8 323 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 ZC3H18Q86VM9 953 aaKnown RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 NLRP14Q86W24 1093 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 MFN1Q8IWA4 741 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 ALLCQ8N6M5 410 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 C12orf50Q8NA57 414 aaPredicted RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 IL17RCQ8NAC3 791 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 NETO2Q8NC67 525 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 FRMD8P1Q9BZ68 369 aaPredicted RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 PRMT8Q9NR22 394 aaPredicted RBP17.1■□□□□ 0.33
GCDH-203ENST00000585420 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 DNPEPQ9ULA0 475 aa17.1■□□□□ 0.33
GCDH-203ENST00000585420 WASH4PA8MWX3 477 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 ATG13O75143 517 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 COILP38432 576 aaPredicted RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 CSTF1Q05048 431 aaKnown RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 SLC10A2Q12908 348 aaPredicted RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 BYSLQ13895 437 aaKnown RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 FSCBQ5H9T9 825 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 TTC39BQ5VTQ0 682 aaPredicted RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 CARNMT1Q8N4J0 409 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 CCDC26Q8TAB7 109 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 CELF6Q96J87 481 aaKnown RBP17.09■□□□□ 0.33
GCDH-203ENST00000585420 NDFIP2Q9NV92 336 aa17.09■□□□□ 0.33
GCDH-203ENST00000585420 H7C0C1 242 aa17.08■□□□□ 0.32
GCDH-203ENST00000585420 OR1E1P30953 314 aa17.08■□□□□ 0.32
GCDH-203ENST00000585420 CD70P32970 193 aa17.08■□□□□ 0.32
GCDH-203ENST00000585420 ATP5OP48047 213 aa17.08■□□□□ 0.32
GCDH-203ENST00000585420 KCNJ1P48048 391 aa17.08■□□□□ 0.32
GCDH-203ENST00000585420 FNTAP49354 379 aa17.08■□□□□ 0.32
GCDH-203ENST00000585420 CDH4P55283 916 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms