RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 PRPF39Q86UA1 669 aaKnown RBP20.97■□□□□ 0.95
TOP3A-219ENST00000584887 XYLT1Q86Y38 959 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 MARCH9Q86YJ5 346 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 ATP11CQ8NB49 1132 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 MSANTD4Q8NCY6 345 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 PIP4K2CQ8TBX8 421 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 TMPRSS4Q9NRS4 437 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 ARHGEF38Q9NXL2 777 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 TBC1D30Q9Y2I9 924 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 PAXBP1Q9Y5B6 917 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 OR51B4Q9Y5P0 310 aa20.97■□□□□ 0.95
TOP3A-219ENST00000584887 ACACAQ13085 2346 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 A0A1W2PR77 199 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 F9P00740 461 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 ITGAVP06756 1048 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 UCHL3P15374 230 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 CDH5P33151 784 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-219ENST00000584887 KRT83P78385 493 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 NAA35Q5VZE5 725 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 NAPEPLDQ6IQ20 393 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 NOP9Q86U38 636 aaKnown RBP20.96■□□□□ 0.95
TOP3A-219ENST00000584887 SH2D3CQ8N5H7 860 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 C2orf49Q9BVC5 232 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-219ENST00000584887 CCDC86Q9H6F5 360 aaKnown RBP20.96■□□□□ 0.95
TOP3A-219ENST00000584887 MPP6Q9NZW5 540 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 VPS51Q9UID3 782 aa20.96■□□□□ 0.95
TOP3A-219ENST00000584887 TPX2Q9ULW0 747 aaKnown RBP20.96■□□□□ 0.95
TOP3A-219ENST00000584887 FARP1Q9Y4F1 1045 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-219ENST00000584887 APC2O95996 2303 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 ANKRD11Q6UB99 2663 aaPredicted RBP20.95■□□□□ 0.94
TOP3A-219ENST00000584887 I6L893 689 aaPredicted RBP20.95■□□□□ 0.94
TOP3A-219ENST00000584887 ALOX15BO15296 676 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 SLC7A4O43246 635 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 PLRG1O43660 514 aaKnown RBP20.95■□□□□ 0.94
TOP3A-219ENST00000584887 LSM8O95777 96 aaKnown RBP20.95■□□□□ 0.94
TOP3A-219ENST00000584887 MT-CO1P00395 513 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 RRM1P23921 792 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 FLT3P36888 993 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 GABRB2P47870 512 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 VASPP50552 380 aaPredicted RBP20.95■□□□□ 0.94
TOP3A-219ENST00000584887 SLC25A52Q3SY17 297 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 C5orf22Q49AR2 442 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 TCP11X2Q5H9J9 407 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 LINGO4Q6UY18 593 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 PROSER1Q86XN7 944 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 CPA5Q8WXQ8 436 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 PSMB7Q99436 277 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 PPM1HQ9ULR3 514 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 PLXNB3Q9ULL4 1909 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 PTPRBP23467 1997 aa20.95■□□□□ 0.94
TOP3A-219ENST00000584887 FAM149AA5PLN7 773 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 F8VZ95 297 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 K7ERQ8 282 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 TLR4O00206 839 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 TAF4O00268 1085 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 KPNA3O00505 521 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-219ENST00000584887 MCF2LO15068 1137 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 LATO43561 262 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 SRGAP2O75044 1071 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 MMEP08473 750 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 SRCP12931 536 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 EEF1GP26641 437 aaKnown RBP20.94■□□□□ 0.94
TOP3A-219ENST00000584887 SCNN1AP37088 669 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 ARRB1P49407 418 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-219ENST00000584887 NXPH1P58417 271 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 AGBL4Q5VU57 503 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 DHRS13Q6UX07 377 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 TMPRSS7Q7RTY8 843 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 MDM1Q8TC05 714 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 PGAP3Q96FM1 320 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-219ENST00000584887 CCDC114Q96M63 670 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 CFAP57Q96MR6 1250 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 MYOCQ99972 504 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 SPON2Q9BUD6 331 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 NAA15Q9BXJ9 866 aaKnown RBP20.94■□□□□ 0.94
TOP3A-219ENST00000584887 HS3ST2Q9Y278 367 aa20.94■□□□□ 0.94
TOP3A-219ENST00000584887 A0A0D9SEW6 157 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 E9PAM4 449 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 CBX4O00257 560 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 YKT6O15498 198 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 GFPT2O94808 682 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 OR1E1P30953 314 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 SHBQ15464 509 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 C6orf118Q5T5N4 469 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 TRNP1Q6NT89 227 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 SETD3Q86TU7 594 aaPredicted RBP20.93■□□□□ 0.94
TOP3A-219ENST00000584887 FAM131BQ86XD5 332 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 ZNF683Q8IZ20 524 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 GALNT15Q8N3T1 639 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 EID2Q8N6I1 236 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 DCAF4L2Q8NA75 395 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 OR7D4Q8NG98 312 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 EPS8L1Q8TE68 723 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 SLC20A1Q8WUM9 679 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 NT5C3BQ969T7 300 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 STK33Q9BYT3 514 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 VPS16Q9H269 839 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 KDM4CQ9H3R0 1056 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 DYRK4Q9NR20 520 aa20.93■□□□□ 0.94
TOP3A-219ENST00000584887 METTL5Q9NRN9 209 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms