RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 HORMAD1Q86X24 394 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 LGI2Q8N0V4 545 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CFAP52Q8N1V2 620 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 ATP6V0D2Q8N8Y2 350 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 BTN2A2Q8WVV5 523 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 NDRG1Q92597 394 aaKnown RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 FAM149B1Q96BN6 582 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 SGF29Q96ES7 293 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 IL12RB2Q99665 862 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 MYOCQ99972 504 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.7□□□□□ -1.023e-6■□□□□ 10.5
SRSF1-207ENST00000584668 TRIM4Q9C037 500 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 STRADBQ9C0K7 418 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 OSBPL2Q9H1P3 480 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 SYNDIG1Q9H7V2 258 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 IPO11Q9UI26 975 aaKnown RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 SLCO3A1Q9UIG8 710 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 INTS6Q9UL03 887 aaKnown RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CFAP45Q9UL16 551 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 MTMR6Q9Y217 621 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CSNK1G3Q9Y6M4 447 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 DOCK9Q9BZ29 2069 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 A0A1W2PQU0 124 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 CPED1A4D0V7 1026 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 CDRT15L2A8MXV6 281 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 K7ESM1 405 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 TULP2O00295 520 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 MCF2LO15068 1137 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 BNIP3LO60238 219 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 PPFIA2O75334 1257 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 TNFSF15O95150 251 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 PCDH8O95206 1070 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 PRNPP04156 253 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 PAEPP09466 180 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 PDGFRAP16234 1089 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 RECQLP46063 649 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 STK19P49842 368 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 KRT83P78385 493 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 SKOR1P84550 965 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 CNTN1Q12860 1018 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 CLN3Q13286 438 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 CDKN3Q16667 212 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 ARL13BQ3SXY8 428 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 DCAF17Q5H9S7 520 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 FSCBQ5H9T9 825 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 C1orf220Q5T0J3 134 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 TCERG1LQ5VWI1 586 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 RESP18Q5W5W9 173 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 RAP1GAP2Q684P5 730 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 ATL3Q6DD88 541 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 NADSYN1Q6IA69 706 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 KIAA1161Q6NSJ0 714 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 LCLAT1Q6UWP7 414 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 KYAT3Q6YP21 454 aaKnown RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 MMS22LQ6ZRQ5 1243 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 ZNF548Q8NEK5 533 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 OR13H1Q8NG92 308 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 UBA3Q8TBC4 463 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 DQX1Q8TE96 717 aaKnown RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 ATXN7L3BQ96GX2 97 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 FCRL2Q96LA5 508 aaPredicted RBP8.69□□□□□ -1.02
SRSF1-207ENST00000584668 HSFY1Q96LI6 401 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 UCKL1Q9NWZ5 548 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 SALL4Q9UJQ4 1053 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 SSUH2Q9Y2M2 353 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
SRSF1-207ENST00000584668 TRPM6Q9BX84 2022 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 EME2A4GXA9 379 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 O00370 1275 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 KPNA3O00505 521 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 TERTO14746 1132 aaKnown RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 TPP1O14773 563 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 CETN3O15182 167 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 AQP9O43315 295 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 ATP9BO43861 1147 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 KLRC4O43908 158 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 AFPP02771 609 aaKnown RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 CSF2P04141 144 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 NME1P15531 152 aaKnown RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 PRLRP16471 622 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 TACR2P21452 398 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 TGM2P21980 687 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 ACADSBP45954 432 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 RGS7P49802 495 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 PLK1P53350 603 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 RPS21P63220 83 aaKnown RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 SRSF1Q07955 248 aaKnown RBP eCLIP8.68□□□□□ -1.021e-10■■■□□ 18.1
SRSF1-207ENST00000584668 CETN1Q12798 172 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 MAPK8IP2Q13387 824 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 PTK2BQ14289 1009 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 EDRF1Q3B7T1 1238 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 ESRP1Q6NXG1 681 aaKnown RBP8.68□□□□□ -1.02
SRSF1-207ENST00000584668 Q6ZSR6 202 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 BEND5Q7L4P6 421 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 ABI3BPQ7Z7G0 1075 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 C14orf80Q86SX3 495 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 JAMLQ86YT9 394 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 LURAP1LQ8IV03 231 aa8.68□□□□□ -1.02
SRSF1-207ENST00000584668 APCDD1Q8J025 514 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms