RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 RCOR2Q8IZ40 523 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 WFDC5Q8TCV5 224 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 RBM41Q96IZ5 413 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 LMLNQ96KR4 655 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 CSPG4P5Q96PW8 444 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ZNF670Q9BS34 389 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 CALN1Q9BXU9 219 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ZYG11BQ9C0D3 744 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 GMEB2Q9UKD1 530 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ANTXRLA6NF34 631 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 PRR5-ARHGAP8B1AHC4 643 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 ZNF487B1APH4 448 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 H0Y626 953 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 FANCGO15287 622 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 CLDN11O75508 207 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 RETP07949 1114 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 PYGMP11217 842 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 EPHB2P29323 1055 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 ARHGAP8P85298 464 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 LMNB2Q03252 620 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 SLC12A1Q13621 1099 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 ENPP2Q13822 863 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 TAZQ16635 292 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 ALFQ53S48 1182 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 TMEM215Q68D42 235 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 SDE2Q6IQ49 451 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 RWDD4Q6NW29 188 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 MFSD7Q6UXD7 560 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 RFX8Q6ZV50 586 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 ADIPOR2Q86V24 386 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 CHPFQ8IZ52 775 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 CARNMT1Q8N4J0 409 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 FAF2Q96CS3 445 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 GABRG3Q99928 467 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 CIPCQ9C0C6 399 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 DLL3Q9NYJ7 618 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 MPP6Q9NZW5 540 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 EBF1Q9UH73 591 aa16.39■□□□□ 0.21
CSNK1D-223ENST00000584472 CHD5Q8TDI0 1954 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 KCNK3O14649 394 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CNTN5O94779 1100 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 RHOQP17081 205 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CD70P32970 193 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CDKN2BP42772 138 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 COPS2P61201 443 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 LMAN2Q12907 356 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 ZNF211Q13398 564 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 DPYSQ14117 519 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 PUM1Q14671 1186 aaKnown RBP eCLIP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 ANKRD20A8PQ5CZ79 823 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CCDC50Q8IVM0 306 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 TSTD1Q8NFU3 115 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 RNF157Q96PX1 679 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 HHIPQ96QV1 700 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 NAPGQ99747 312 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CARD9Q9H257 536 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 RETREG1Q9H6L5 497 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 CATSPERBQ9H7T0 1116 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 POLR3BQ9NW08 1133 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 KIAA1522Q9P206 1035 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 THAP10Q9P2Z0 257 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 ZNF212Q9UDV6 495 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 DNAI1Q9UI46 699 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 DNAH14Q0VDD8 3507 aa16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 MUC22E2RYF6 1773 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-223ENST00000584472 NUP205Q92621 2012 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 CTAGE9A4FU28 777 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 WASH4PA8MWX3 477 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 FGF10O15520 208 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 DAPK3O43293 454 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 ALDH1A2O94788 518 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 HOXB2P14652 356 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 ERCC2P18074 760 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 POLR2EP19388 210 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 TGM1P22735 817 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 AMPD1P23109 780 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 FNTBP49356 437 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 CDH4P55283 916 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 ZNF177Q13360 481 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 SIM2Q14190 667 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 PPP2R5EQ16537 467 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 FUT11Q495W5 492 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 TFDP3Q5H9I0 405 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 FSCBQ5H9T9 825 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 MBLAC2Q68D91 279 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 AADACL2Q6P093 401 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 TMEM92Q6UXU6 159 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 NLRP14Q86W24 1093 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 KIAA2013Q8IYS2 634 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 PCDH19Q8TAB3 1148 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 TTC17Q96AE7 1141 aa16.37■□□□□ 0.21
CSNK1D-223ENST00000584472 ACOX2Q99424 681 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms