RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 PAAF1Q9BRP4 392 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CNPY3Q9BT09 278 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ACE2Q9BYF1 805 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 SNX25Q9H3E2 840 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ATXN3LQ9H3M9 355 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ACSS3Q9H6R3 686 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 POPDC2Q9HBU9 364 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TLR8Q9NR97 1041 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TMEM30AQ9NV96 361 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TMEM248Q9NWD8 314 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CHD9Q3L8U1 2897 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 HMX2A2RU54 273 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 HACD1B0YJ81 288 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PROB1E7EW31 1015 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 F8W735 103 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ZNF263O14978 683 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 SLC7A4O43246 635 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TEX33O43247 280 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 THAP12O43422 761 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ZNF500O60304 480 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PROSCO94903 275 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LUC7L3O95232 432 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ASLP04424 464 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 THBDP07204 575 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CISD3P0C7P0 127 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TRIM49P0CI25 452 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TRIM49CP0CI26 452 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 NOS3P29474 1203 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 HSPA9P38646 679 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PEX5P50542 639 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 SLC20A2Q08357 652 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 KLF1Q13351 362 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 MAMLD1Q13495 774 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 IFI16Q16666 785 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CTXN3Q4LDR2 81 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ARHGAP29Q52LW3 1261 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 E4F1Q66K89 784 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 NUGGCQ68CJ6 796 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ISM2Q6H9L7 571 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 FSTL4Q6MZW2 842 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 OTOP3Q7RTS5 596 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 C14orf80Q86SX3 495 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 C11orf74Q86VG3 221 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CPNE8Q86YQ8 564 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LRRC8AQ8IWT6 810 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 UNC45BQ8IWX7 931 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 NELFCDQ8IXH7 590 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 THNSL1Q8IYQ7 743 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CBARPQ8N350 705 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CELF5Q8N6W0 485 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ALG14Q96F25 216 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LRIG1Q96JA1 1093 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 MRGPRX3Q96LB0 322 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PLIN2Q99541 437 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CDX2Q99626 313 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TCF25Q9BQ70 676 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ASPSCR1Q9BZE9 553 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 IKZF4Q9H2S9 585 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 HAUS4Q9H6D7 363 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 UBE2ZQ9H832 354 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PDFQ9HBH1 243 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ATP13A1Q9HD20 1204 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LUC7LQ9NQ29 371 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 C1GALT1Q9NS00 363 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 DLGAP2Q9P1A6 1054 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 IP6K2Q9UHH9 426 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TSPAN16Q9UKR8 245 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 FZD10Q9ULW2 581 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LUC7L2Q9Y383 392 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 NEU2Q9Y3R4 380 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PRKAB1Q9Y478 270 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 GOLGB1Q14789 3259 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LRRC53A6NM62 1247 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 NCAM2O15394 837 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PPM1BO75688 479 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ZBED1O96006 694 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 GSRP00390 522 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 H2AFZP0C0S5 128 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TSHRP16473 764 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 TNNI1P19237 187 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 NR2C2P49116 596 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 GATMP50440 423 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 GFRA1P56159 465 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 RPL26P61254 145 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 IFI35P80217 286 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 UBXN1Q04323 297 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PTPN20Q4JDL3 420 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 SYDE1Q6ZW31 735 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 H2AFVQ71UI9 128 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 LUZP1Q86V48 1076 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 VPS36Q86VN1 386 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 RALGPS2Q86X27 583 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 SYCE1Q8N0S2 351 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 ARMC10Q8N2F6 343 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CISD2Q8N5K1 135 aaKnown RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 STKLD1Q8NE28 680 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.13□□□□□ -1.91
CCDC178-213ENST00000583930 OSCP1Q8WVF1 389 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 CHFRQ96EP1 664 aa3.13□□□□□ -1.91
CCDC178-213ENST00000583930 PPP1R13BQ96KQ4 1090 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms