RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 EPHA8P29322 1005 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 PSMD8P48556 350 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 ACADVLP49748 655 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 ADPRHP54922 357 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 DRAP1Q14919 205 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 SFMBT2Q5VUG0 894 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 ENOSF1Q7L5Y1 443 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 EID2Q8N6I1 236 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 ADAM32Q8TC27 787 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 SYN2Q92777 582 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 KAT5Q92993 513 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 BAG1Q99933 345 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 MIS12Q9H081 205 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 ZNHIT6Q9NWK9 470 aaKnown RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 XPO7Q9UIA9 1087 aaKnown RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 ATMQ13315 3056 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 TYW5A2RUC4 315 aaKnown RBP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 TLX3O43711 291 aaPredicted RBP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 LUC7L3O95232 432 aaKnown RBP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 MOCS2O96007 188 aaPredicted RBP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 JUPP14923 745 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 HNRNPH3P31942 346 aaKnown RBP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 HNF1BP35680 557 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 NUMBP49757 651 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 CCR5P51681 352 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 PPP2CBP62714 309 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 PPP2CAP67775 309 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 CCZ1BP86790 482 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 CCZ1P86791 482 aaPredicted RBP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 CNGA2Q16280 664 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 DCAF6Q58WW2 860 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 STK40Q8N2I9 435 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 SKA1Q96BD8 255 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 SLC39A13Q96H72 371 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 KREMEN1Q96MU8 473 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 GDF3Q9NR23 364 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 TLR6Q9Y2C9 796 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 PCDHB4Q9Y5E5 795 aa21.11■□□□□ 0.97
SRSF1-206ENST00000583741 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.11■□□□□ 0.97
SRSF1-206ENST00000583741 EDDM13A0A1B0GTR0 161 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 TARSL2A2RTX5 802 aaKnown RBP21.1■□□□□ 0.97
SRSF1-206ENST00000583741 PRB1P04280 392 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 SRPRAP08240 638 aaKnown RBP21.1■□□□□ 0.97
SRSF1-206ENST00000583741 STAT1P42224 750 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 NXPH1P58417 271 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 SEMG2Q02383 582 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 SFSWAPQ12872 951 aaKnown RBP21.1■□□□□ 0.97
SRSF1-206ENST00000583741 TARDBPQ13148 414 aaKnown RBP eCLIP21.1■□□□□ 0.97
SRSF1-206ENST00000583741 C6orf118Q5T5N4 469 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 HES3Q5TGS1 186 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 TMEM139Q8IV31 216 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 APCDD1Q8J025 514 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 OR14C36Q8NHC7 312 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 TSC1Q92574 1164 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 PTPRN2Q92932 1015 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 SERAC1Q96JX3 654 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 RPL10LQ96L21 214 aaKnown RBP21.1■□□□□ 0.97
SRSF1-206ENST00000583741 HSFY1Q96LI6 401 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 SERPINB11Q96P15 392 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 DDX50Q9BQ39 737 aaKnown RBP21.1■□□□□ 0.97
SRSF1-206ENST00000583741 NAALADL1Q9UQQ1 740 aa21.1■□□□□ 0.97
SRSF1-206ENST00000583741 SKILP12757 684 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 GOT1P17174 413 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 FECHP22830 423 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 SOX5P35711 763 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 ARRB1P49407 418 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-206ENST00000583741 STK19P49842 368 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-206ENST00000583741 METAP1P53582 386 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 ECT2LQ008S8 904 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 BNIP3Q12983 259 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 ASIC2Q16515 512 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 MEA1Q16626 185 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 E4F1Q66K89 784 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-206ENST00000583741 WDR59Q6PJI9 974 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 SND1Q7KZF4 910 aaKnown RBP eCLIP21.09■□□□□ 0.97
SRSF1-206ENST00000583741 TAC4Q86UU9 113 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 UBL7Q96S82 380 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-206ENST00000583741 AIPL1Q9NZN9 384 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 CEP83Q9Y592 693 aa21.09■□□□□ 0.97
SRSF1-206ENST00000583741 TLR4O00206 839 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 FBXO21O94952 628 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 ZIC2O95409 532 aaPredicted RBP21.08■□□□□ 0.97
SRSF1-206ENST00000583741 C1SP09871 688 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 PNMA6AP0CW24 399 aaPredicted RBP21.08■□□□□ 0.97
SRSF1-206ENST00000583741 VAV1P15498 845 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 C5AR1P21730 350 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 MZF1P28698 734 aaPredicted RBP21.08■□□□□ 0.97
SRSF1-206ENST00000583741 EIF2S3P41091 472 aaKnown RBP21.08■□□□□ 0.97
SRSF1-206ENST00000583741 NNTQ13423 1086 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 SYPL2Q5VXT5 272 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 FBXL19Q6PCT2 694 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 TMTC1Q8IUR5 882 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 CCDC117Q8IWD4 279 aaPredicted RBP21.08■□□□□ 0.97
SRSF1-206ENST00000583741 LGI2Q8N0V4 545 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 SHC3Q92529 594 aa21.08■□□□□ 0.97
SRSF1-206ENST00000583741 FOXN3O00409 490 aaPredicted RBP21.07■□□□□ 0.96
SRSF1-206ENST00000583741 YKT6O15498 198 aa21.07■□□□□ 0.96
SRSF1-206ENST00000583741 LATO43561 262 aa21.07■□□□□ 0.96
SRSF1-206ENST00000583741 ADH1BP00325 375 aa21.07■□□□□ 0.96
SRSF1-206ENST00000583741 CDK4P11802 303 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms