RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TEX19Q8NA77 164 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 LSM14AQ8ND56 463 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 BCAS4Q8TDM0 211 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 NTN5Q8WTR8 489 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 RUFY2Q8WXA3 655 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 ZBTB10Q96DT7 871 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 MPP4Q96JB8 637 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 SIGLEC11Q96RL6 698 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 NPLQ9BXD5 320 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 SEMA4CQ9C0C4 833 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 PAIP1Q9H074 479 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 TTYH1Q9H313 450 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 TTC12Q9H892 705 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 CCDC196A0A1B0GTZ2 297 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 HLA-DQA2P01906 255 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 CELA2AP08217 269 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 PRR35P0CG20 571 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 CTSAP10619 480 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 CD38P28907 300 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 RPS13P62277 151 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 PMPCAQ10713 525 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 GPR68Q15743 365 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 C5orf22Q49AR2 442 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 FBXO43Q4G163 708 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 MIDNQ504T8 468 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 B4GALNT4Q76KP1 1039 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 NEK8Q86SG6 692 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 RFWD2Q8NHY2 731 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 WIPF2Q8TF74 440 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 IGFBPL1Q8WX77 278 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 CUL5Q93034 780 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 ZUFSPQ96AP4 578 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 RNF125Q96EQ8 232 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 ZNF419Q96HQ0 510 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 CLSTN3Q9BQT9 956 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 LMAN2LQ9H0V9 348 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 DHDHQ9UQ10 334 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 LAMP3Q9UQV4 416 aa6.06□□□□□ -1.44
SMARCE1-219ENST00000583294 TARSL2A2RTX5 802 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 CGB1A6NKQ9 187 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 HBP1O60381 514 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 TULP3O75386 442 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 NEURL1O76050 574 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 KELP23276 732 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 SKIV2L2P42285 1042 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 RPP30P78346 268 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 ID2Q02363 134 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 PAPD7Q5XG87 772 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 AADACL2Q6P093 401 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 GJB7Q6PEY0 223 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 GHDCQ8N2G8 530 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 SETD9Q8NE22 299 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 CNOT9Q92600 299 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 EME1Q96AY2 570 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 SH3KBP1Q96B97 665 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 ELP4Q96EB1 424 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 APOPT1Q96IL0 206 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 EYA3Q99504 573 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 IFT27Q9BW83 186 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 PRSS22Q9GZN4 317 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 SLC32A1Q9H598 525 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 PAPOLBQ9NRJ5 636 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 ICKQ9UPZ9 632 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
SMARCE1-219ENST00000583294 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 OR6C68A6NDL8 312 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 F8W810 466 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 MASP2O00187 686 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 TNPO2O14787 897 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 PER2O15055 1255 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 GUCY1B2O75343 617 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 TNFAIP3P21580 790 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 ELF1P32519 619 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 KRT9P35527 623 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 GJC1P36383 396 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 CDH15P55291 814 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 SLC18A3Q16572 532 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 PLK5Q496M5 336 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 KIAA1614Q5VZ46 1190 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 TTLL5Q6EMB2 1281 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 HMBOX1Q6NT76 420 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 UBE2Q1Q7Z7E8 422 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 MON1AQ86VX9 555 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 DDIASQ8IXT1 998 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 PRSS3P2Q8NHM4 247 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 TBC1D22AQ8WUA7 517 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 MPHOSPH8Q99549 860 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 AGXT2Q9BYV1 514 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 INTS2Q9H0H0 1204 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 HIPK3Q9H422 1215 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 NRIP3Q9NQ35 241 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 NLKQ9UBE8 527 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 ZNF69Q9UC07 566 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 FRMD4BQ9Y2L6 1034 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 CYP46A1Q9Y6A2 500 aa6.04□□□□□ -1.44
SMARCE1-219ENST00000583294 TMEM247A6NEH6 219 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 FOXO6A8MYZ6 492 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 DDAH2O95865 285 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms