RNA–Protein interactions for RNA: ENST00000583153.2

PTPRM-214, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-214ENST00000583153 DLG2Q15700 870 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 ZSCAN23Q3MJ62 389 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 PEAR1Q5VY43 1037 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-214ENST00000583153 WDR59Q6PJI9 974 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 USP30Q70CQ3 517 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 STRADAQ7RTN6 431 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 IRF2BP2Q7Z5L9 587 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 DSG4Q86SJ6 1040 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 SETD3Q86TU7 594 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-214ENST00000583153 LUZP1Q86V48 1076 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 ZNF354CQ86Y25 554 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 OR52K2Q8NGK3 314 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 FAM172AQ8WUF8 416 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 MCEEQ96PE7 176 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 FAM129BQ96TA1 746 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 FUCA2Q9BTY2 467 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 C2orf49Q9BVC5 232 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-214ENST00000583153 ZYG11BQ9C0D3 744 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 NEUROG2Q9H2A3 272 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
PTPRM-214ENST00000583153 SLC32A1Q9H598 525 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 C6orf106Q9H6K1 298 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-214ENST00000583153 CBX8Q9HC52 389 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 OR12D3Q9UGF7 316 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 MYO6Q9UM54 1294 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D30Q9Y2I9 924 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 ZKSCAN5Q9Y2L8 839 aa8.54□□□□□ -1.04
PTPRM-214ENST00000583153 ASCC3Q8N3C0 2202 aaKnown RBP8.54□□□□□ -1.04
PTPRM-214ENST00000583153 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 NUMA1Q14980 2115 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3DA0A087WVF3 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3IA0A087WXS9 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3EA0A087X179 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3KA0A087X1G2 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 A0A0D9SEW6 157 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 A0A1B0GTH6 734 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3FA6NER0 549 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 LRRC72A6NJI9 287 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 C2CD4BA6NLJ0 364 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3LB9A6J9 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 I6L893 689 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 CBX4O00257 560 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TM4SF5O14894 197 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 SNAP91O60641 907 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 KCNK5O95279 499 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ADH1BP00325 375 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3HP0C7X1 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 VAV1P15498 845 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 C5AR1P21730 350 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 RRM1P23921 792 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 PTPN9P43378 593 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 RECQLP46063 649 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 NOVA1P51513 510 aaKnown RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 FANCCQ00597 558 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 KLHL30Q0D2K2 578 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 PTP4A2Q12974 167 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ELAVL3Q14576 367 aaKnown RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TEAD4Q15561 434 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 POM121L1PQ3SYA9 428 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 C5orf22Q49AR2 442 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 RAB6CQ53S08 254 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3GQ6DHY5 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3CQ6IPX1 549 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 PSAPL1Q6NUJ1 521 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 PPP1R2P3Q6NXS1 205 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 MON1BQ7L1V2 547 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ADAT2Q7Z6V5 191 aaKnown RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 SLFN11Q7Z7L1 901 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 DRC7Q8IY82 874 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 MCOLN2Q8IZK6 566 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 TBC1D3Q8IZP1 549 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 SH2D3CQ8N5H7 860 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 MINDY1Q8N5J2 469 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 C3orf20Q8ND61 904 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 OR7D4Q8NG98 312 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 OR2I1PQ8NGU4 316 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 OR14C36Q8NHC7 312 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 DNASE2BQ8WZ79 361 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 BAP1Q92560 729 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 BIRC7Q96CA5 298 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ALG14Q96F25 216 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 CCDC114Q96M63 670 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 RAB6CQ9H0N0 254 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 RBSNQ9H1K0 784 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 PCED1AQ9H1Q7 454 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 HAUS4Q9H6D7 363 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 CAPN10Q9HC96 672 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 SERGEFQ9UGK8 458 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 PRDM4Q9UKN5 801 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-214ENST00000583153 OR51B4Q9Y5P0 310 aa8.53□□□□□ -1.04
PTPRM-214ENST00000583153 ITIH6Q6UXX5 1313 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms