RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 GSDMAQ96QA5 445 aa16.61■□□□□ 0.25
SREBF1-221ENST00000583080 LGMNQ99538 433 aa16.61■□□□□ 0.25
SREBF1-221ENST00000583080 SLC25A13Q9UJS0 675 aa16.61■□□□□ 0.25
SREBF1-221ENST00000583080 RNF103O00237 685 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 MCF2LO15068 1137 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 SLC31A1O15431 190 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 RNGTTO60942 597 aaKnown RBP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 MPOP05164 745 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 CTSLP07711 333 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 GIMD1P0DJR0 217 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 KRT5P13647 590 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 YWHAZP63104 245 aaKnown RBP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 E2F1Q01094 437 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 KCNH2Q12809 1159 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 TTC39BQ5VTQ0 682 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 CDCP2Q5VXM1 449 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 ZNF605Q86T29 641 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 RPRD1AQ96P16 312 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 FEM1AQ9BSK4 669 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 TRIM62Q9BVG3 475 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 PREBQ9HCU5 417 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.6■□□□□ 0.25
SREBF1-221ENST00000583080 CNTN6Q9UQ52 1028 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 OR51B4Q9Y5P0 310 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 TENM4Q6N022 2769 aa16.6■□□□□ 0.25
SREBF1-221ENST00000583080 TDRD6O60522 2096 aaKnown RBP16.59■□□□□ 0.25
SREBF1-221ENST00000583080 LY6G6EA0A0G2JKS1 128 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 A0A1W2PQU0 124 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 ALOX15BO15296 676 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-221ENST00000583080 ZNF18P17022 549 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
SREBF1-221ENST00000583080 GABREP78334 506 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 CFHR1Q03591 330 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 KCNMA1Q12791 1236 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 PDCLQ13371 301 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 AUHQ13825 339 aaKnown RBP16.59■□□□□ 0.25
SREBF1-221ENST00000583080 TMEM110Q86TL2 294 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 SLC22A18ASQ8N1D0 253 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 SH2D3CQ8N5H7 860 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 ZNF248Q8NDW4 579 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 OR13H1Q8NG92 308 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 ARRDC3Q96B67 414 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 HIC2Q96JB3 615 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 CEP63Q96MT8 703 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 NOX5Q96PH1 765 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 CALN1Q9BXU9 219 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 INTS2Q9H0H0 1204 aaKnown RBP16.59■□□□□ 0.25
SREBF1-221ENST00000583080 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 KLHL11Q9NVR0 708 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 DDIT4Q9NX09 232 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 VPS28Q9UK41 221 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 VANGL2Q9ULK5 521 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 U3KQA8 63 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 ATMQ13315 3056 aa16.59■□□□□ 0.25
SREBF1-221ENST00000583080 PSMA7O14818 248 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 P4HA2O15460 535 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 OPA1O60313 960 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 PIAS2O75928 621 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 MT-CO1P00395 513 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 CKMT1AP12532 417 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 SRCP12931 536 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 CLDN2P57739 230 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF284Q2VY69 593 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 GCNT7Q6ZNI0 430 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 C14orf80Q86SX3 495 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 DEFB106AQ8N104 65 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 EHBP1Q8NDI1 1231 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 APOLD1Q96LR9 279 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 SLC2A13Q96QE2 648 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 SLC12A6Q9UHW9 1150 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 HS3ST4Q9Y661 456 aa16.58■□□□□ 0.24
SREBF1-221ENST00000583080 COL27A1Q8IZC6 1860 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-221ENST00000583080 K7ERQ8 282 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 ERVH48-1M5A8F1 160 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 KPNA3O00505 521 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-221ENST00000583080 THAP12O43422 761 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 SNAP91O60641 907 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 CSO75390 466 aaKnown RBP16.57■□□□□ 0.24
SREBF1-221ENST00000583080 GRAP2O75791 330 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 SMC2O95347 1197 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 CCR1P32246 355 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 OXCT1P55809 520 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 CDK17Q00537 523 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 CETN1Q12798 172 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 MEA1Q16626 185 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 TAF1BQ53T94 588 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF542PQ5EBM4 170 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 SEL1L3Q68CR1 1132 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 TTI2Q6NXR4 508 aa16.57■□□□□ 0.24
SREBF1-221ENST00000583080 HORMAD1Q86X24 394 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms