RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.96□□□□□ -0.17
SS18-222ENST00000582792 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
SS18-222ENST00000582792 A0A1B0GVM2 712 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 TCAF2A6NFQ2 919 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 C1QTNF3-AMACRE9PGA6 284 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 TRIM38O00635 465 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 ALOX15BO15296 676 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 P4HA2O15460 535 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 ATP9BO43861 1147 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 TRUB2O95900 331 aaKnown RBP13.95□□□□□ -0.18
SS18-222ENST00000582792 MT-CO3P00414 261 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 PLA2G2AP14555 144 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
SS18-222ENST00000582792 CETN1Q12798 172 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 CNTN1Q12860 1018 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 RABGAP1LQ5R372 815 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 TTI2Q6NXR4 508 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 CAVIN1Q6NZI2 390 aaKnown RBP13.95□□□□□ -0.18
SS18-222ENST00000582792 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 KDM7AQ6ZMT4 941 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 RRAGAQ7L523 313 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 ARHGEF19Q8IW93 802 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 SLC25A45Q8N413 288 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 OR4C6Q8NH72 309 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 STK32AQ8WU08 396 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 ALG14Q96F25 216 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 KLHDC7BQ96G42 594 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 SLC4A5Q9BY07 1137 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 PREBQ9HCU5 417 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 ANO10Q9NW15 660 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 SLC12A6Q9UHW9 1150 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 SLC25A13Q9UJS0 675 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 PPM1HQ9ULR3 514 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 DOCK9Q9BZ29 2069 aa13.95□□□□□ -0.18
SS18-222ENST00000582792 E5RJQ4 531 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 MCF2LO15068 1137 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 RNGTTO60942 597 aaKnown RBP13.94□□□□□ -0.18
SS18-222ENST00000582792 FGFR1OPO95684 399 aaKnown RBP13.94□□□□□ -0.18
SS18-222ENST00000582792 DGKAP23743 735 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 TAS2R38P59533 333 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 YWHAZP63104 245 aaKnown RBP13.94□□□□□ -0.18
SS18-222ENST00000582792 CXADRP78310 365 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
SS18-222ENST00000582792 DAB2P98082 770 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 NFKBIBQ15653 356 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 MEA1Q16626 185 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 ACCSLQ4AC99 568 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 DENND1BQ6P3S1 775 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 SASS6Q6UVJ0 657 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 ZNF605Q86T29 641 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 TMEM110Q86TL2 294 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 TMEM145Q8NBT3 493 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 ZNF248Q8NDW4 579 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 COL26A1Q96A83 441 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 MED15Q96RN5 788 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 PPP1R9BQ96SB3 815 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 LGMNQ99538 433 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 THAP9Q9H5L6 903 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 CNTN6Q9UQ52 1028 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 CA5BQ9Y2D0 317 aa13.94□□□□□ -0.18
SS18-222ENST00000582792 GNA14O95837 355 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 THEGLP0DJG4 465 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 SLC2A3P11169 496 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 ZNF18P17022 549 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 CFHR1Q03591 330 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 KCNMA1Q12791 1236 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 DLG2Q15700 870 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 CCDC40Q4G0X9 1142 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 HS1BP3Q53T59 392 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 CDCP2Q5VXM1 449 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 KLHL10Q6JEL2 608 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 FBXL22Q6P050 247 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 Q6ZVU0 165 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 OR52K2Q8NGK3 314 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 KREMEN1Q96MU8 473 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 ZNF578Q96N58 590 aaPredicted RBP13.93□□□□□ -0.18
SS18-222ENST00000582792 FEM1AQ9BSK4 669 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 KLHL11Q9NVR0 708 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 UCKL1Q9NWZ5 548 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 CTNND2Q9UQB3 1225 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 PCDHB1Q9Y5F3 818 aa13.93□□□□□ -0.18
SS18-222ENST00000582792 CAPN8A6NHC0 703 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 ERVH48-1M5A8F1 160 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 MED7O43513 233 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 GIMD1P0DJR0 217 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 CKMT1AP12532 417 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 KRT5P13647 590 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 CCR1P32246 355 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 PCBP4P57723 403 aaKnown RBP13.92□□□□□ -0.18
SS18-222ENST00000582792 CDK17Q00537 523 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 CENPCQ03188 943 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 KCNH2Q12809 1159 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 TAF5Q15542 800 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 STX1AQ16623 288 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 DPCR1Q3MIW9 517 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 PIP5KL1Q5T9C9 394 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 NEK5Q6P3R8 708 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 SH2D3CQ8N5H7 860 aa13.92□□□□□ -0.18
SS18-222ENST00000582792 EHBP1Q8NDI1 1231 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms