RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 IL1BP01584 269 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 VAV1P15498 845 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 DRD3P35462 400 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 GGCXP38435 758 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 RNASE9P60153 205 aaKnown RBP21.48■■□□□ 1.03
CCDC42-203ENST00000581598 DEUP1Q05D60 604 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 TAF3Q5VWG9 929 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 FAM46CQ5VWP2 391 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 SETD3Q86TU7 594 aaPredicted RBP21.48■■□□□ 1.03
CCDC42-203ENST00000581598 SH2D3CQ8N5H7 860 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 ANKRD20A12PQ8NF67 263 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 SETD7Q8WTS6 366 aaKnown RBP21.48■■□□□ 1.03
CCDC42-203ENST00000581598 OR8D1Q8WZ84 308 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 TBCBQ99426 244 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 CDC6Q99741 560 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 ACE2Q9BYF1 805 aaPredicted RBP21.48■■□□□ 1.03
CCDC42-203ENST00000581598 EBF2Q9HAK2 575 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 TMEM59LQ9UK28 342 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 HS3ST2Q9Y278 367 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 IGF2RP11717 2491 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 IGLV3-10A0A075B6K4 115 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 MCF2LO15068 1137 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 LATO43561 262 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 CNTN5O94779 1100 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 CDK11BP21127 795 aaKnown RBP21.47■■□□□ 1.03
CCDC42-203ENST00000581598 FLT3P36888 993 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 CCT8P50990 548 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 KRT83P78385 493 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 FANCCQ00597 558 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 DLG2Q15700 870 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 LRRC31Q6UY01 552 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 ADAT2Q7Z6V5 191 aaKnown RBP21.47■■□□□ 1.03
CCDC42-203ENST00000581598 CHCHD4Q8N4Q1 142 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 SKA1Q96BD8 255 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 NOCTQ9UK39 431 aaKnown RBP21.47■■□□□ 1.03
CCDC42-203ENST00000581598 PPM1HQ9ULR3 514 aa21.47■■□□□ 1.03
CCDC42-203ENST00000581598 H0Y8X5 98 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 CYP1A1P04798 512 aaPredicted RBP21.46■■□□□ 1.03
CCDC42-203ENST00000581598 TPM2P07951 284 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 MMEP08473 750 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 NUDT1P36639 197 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 COPB1P53618 953 aaKnown RBP21.46■■□□□ 1.03
CCDC42-203ENST00000581598 ALFQ53S48 1182 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 KCNT1Q5JUK3 1230 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 OR14C36Q8NHC7 312 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 RHBDD1Q8TEB9 315 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 SLC6A18Q96N87 628 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 HAPLN3Q96S86 360 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 PSMB7Q99436 277 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 C2orf49Q9BVC5 232 aaPredicted RBP21.46■■□□□ 1.03
CCDC42-203ENST00000581598 MUC3BQ9H195 1237 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 VPS16Q9H269 839 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 RALYQ9UKM9 306 aaKnown RBP21.46■■□□□ 1.03
CCDC42-203ENST00000581598 ZMIZ1Q9ULJ6 1067 aa21.46■■□□□ 1.03
CCDC42-203ENST00000581598 A0A1W2PR77 199 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 C1QTNF3-AMACRE9PGA6 284 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 DKK1O94907 266 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 ENDOD1O94919 500 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 RHOCP08134 193 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 NUMBP49757 651 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 C21orf59P57076 290 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 JAM2P57087 298 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 ACCSLQ4AC99 568 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 ARTNQ5T4W7 220 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 NAA35Q5VZE5 725 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 TRNP1Q6NT89 227 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 LAYNQ6UX15 382 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 DCAF4L2Q8NA75 395 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 CPA5Q8WXQ8 436 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 SARDHQ9UL12 918 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 WDFY3Q8IZQ1 3526 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 PTPRBP23467 1997 aa21.45■■□□□ 1.02
CCDC42-203ENST00000581598 COL5A1P20908 1838 aaPredicted RBP21.44■■□□□ 1.02
CCDC42-203ENST00000581598 A0A1B0GTH6 734 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 A0A1B0GTQ1 180 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 PLRG1O43660 514 aaKnown RBP21.44■■□□□ 1.02
CCDC42-203ENST00000581598 WNT1P04628 370 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 SRCP12931 536 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 CD38P28907 300 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 SOX5P35711 763 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 GRK6P43250 576 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 CLCN6P51797 869 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 CDR2Q01850 454 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 C2CD6Q53TS8 623 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 FKBP15Q5T1M5 1219 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 C6orf118Q5T5N4 469 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.44■■□□□ 1.02
CCDC42-203ENST00000581598 ZNF783Q6ZMS7 281 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 SLCO6A1Q86UG4 719 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 PIP4K2CQ8TBX8 421 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 TOR4AQ9NXH8 423 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 VPS51Q9UID3 782 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 BTBD3Q9Y2F9 522 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 SIK3Q9Y2K2 1263 aa21.44■■□□□ 1.02
CCDC42-203ENST00000581598 PLXNB3Q9ULL4 1909 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 LGALS16A8MUM7 142 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 E9PAM4 449 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 GOLGA8SH3BPF8 625 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 GFPT2O94808 682 aa21.43■■□□□ 1.02
CCDC42-203ENST00000581598 MMP8P22894 467 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms