RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 FAM114A1Q8IWE2 563 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 CRYBG2Q8N1P7 616 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 KCTD17Q8N5Z5 321 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 KYQ8NBH2 561 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 GFM1Q96RP9 751 aaKnown RBP11.42□□□□□ -0.58
GGA3-206ENST00000578773 CPEB1Q9BZB8 566 aaKnown RBP11.42□□□□□ -0.58
GGA3-206ENST00000578773 CLPBQ9H078 707 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 SIRPGQ9P1W8 387 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 TPX2Q9ULW0 747 aaKnown RBP11.42□□□□□ -0.58
GGA3-206ENST00000578773 PADI4Q9UM07 663 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 VPS4AQ9UN37 437 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 CCDC168Q8NDH2 2452 aa11.42□□□□□ -0.58
GGA3-206ENST00000578773 A0A087X0B3 334 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 CLSTN1O94985 981 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 PDGFAP04085 211 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 ASLP04424 464 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 CCL4P13236 92 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 JUNDP17535 347 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 HNRNPA2B1P22626 353 aaKnown RBP11.41□□□□□ -0.58
GGA3-206ENST00000578773 CCKBRP32239 447 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 ADKP55263 362 aaKnown RBP11.41□□□□□ -0.58
GGA3-206ENST00000578773 YWHAGP61981 247 aaKnown RBP eCLIP11.41□□□□□ -0.58
GGA3-206ENST00000578773 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 EIF3IQ13347 325 aaKnown RBP11.41□□□□□ -0.58
GGA3-206ENST00000578773 BMT2Q1RMZ1 405 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 EIF2S3LQ2VIR3 472 aaKnown RBP11.41□□□□□ -0.58
GGA3-206ENST00000578773 ZNF699Q32M78 642 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 PRR30Q53SZ7 412 aaPredicted RBP11.41□□□□□ -0.58
GGA3-206ENST00000578773 ADGRF1Q5T601 910 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 SV2AQ7L0J3 742 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 TADA2BQ86TJ2 420 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 SFTPA2Q8IWL1 248 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 CFAP52Q8N1V2 620 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 CARNMT1Q8N4J0 409 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 FRS2Q8WU20 508 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 EDEM1Q92611 657 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 DONSONQ9NYP3 566 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
GGA3-206ENST00000578773 SPG11Q96JI7 2443 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 DIDO1Q9BTC0 2240 aaKnown RBP11.4□□□□□ -0.58
GGA3-206ENST00000578773 SPTY2D1-AS1A0A0U1RR47 76 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 A0A1W2PQ27 194 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 A0A1W2PQ64 194 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 A0A1W2PQC6 194 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 SLC7A4O43246 635 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 CTSLP07711 333 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 AKT2P31751 481 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 NUDT1P36639 197 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 PSEN1P49768 467 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 TRPC3Q13507 836 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 ELAVL3Q14576 367 aaKnown RBP11.4□□□□□ -0.58
GGA3-206ENST00000578773 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 PSMD6Q15008 389 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 SURF1Q15526 300 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 SNRNP35Q16560 246 aaKnown RBP11.4□□□□□ -0.58
GGA3-206ENST00000578773 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 GALNT11Q8NCW6 608 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 FIBINQ8TAL6 211 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 CYFIP2Q96F07 1278 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 IFT43Q96FT9 208 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 CALML4Q96GE6 196 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 IL12RB2Q99665 862 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 LRRC61Q9BV99 259 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 UNKQ9C0B0 810 aaKnown RBP11.4□□□□□ -0.58
GGA3-206ENST00000578773 STRADBQ9C0K7 418 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 CUEDC1Q9NWM3 386 aaPredicted RBP11.4□□□□□ -0.58
GGA3-206ENST00000578773 GULP1Q9UBP9 304 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 ERRFI1Q9UJM3 462 aaPredicted RBP11.4□□□□□ -0.58
GGA3-206ENST00000578773 KCND3Q9UK17 655 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 STRIP2Q9ULQ0 834 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 CSNK1G3Q9Y6M4 447 aa11.4□□□□□ -0.58
GGA3-206ENST00000578773 A6NNZ2 444 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 TULP2O00295 520 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 LDLRP01130 860 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 SRPRAP08240 638 aaKnown RBP11.39□□□□□ -0.59
GGA3-206ENST00000578773 ECT2LQ008S8 904 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 PRRT3Q5FWE3 981 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 ZNF667Q5HYK9 610 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 PPP1R26Q5T8A7 1209 aaPredicted RBP11.39□□□□□ -0.59
GGA3-206ENST00000578773 PARGQ86W56 976 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 HEATR4Q86WZ0 1026 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 HORMAD1Q86X24 394 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 NAT6Q93015 286 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 SYAP1Q96A49 352 aaPredicted RBP11.39□□□□□ -0.59
GGA3-206ENST00000578773 SEMA6CQ9H3T2 930 aa11.39□□□□□ -0.59
GGA3-206ENST00000578773 ARHGAP10A1A4S6 786 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.38□□□□□ -0.59
GGA3-206ENST00000578773 CLIC2O15247 247 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 YY2O15391 372 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 ATICP31939 592 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 UBA7P41226 1012 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 ASPAP45381 313 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 CYP2J2P51589 502 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 ZFP36L1Q07352 338 aaKnown RBP11.38□□□□□ -0.59
GGA3-206ENST00000578773 CDC20Q12834 499 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 PDE1CQ14123 709 aaPredicted RBP11.38□□□□□ -0.59
GGA3-206ENST00000578773 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 ARHGAP44Q17R89 818 aa11.38□□□□□ -0.59
GGA3-206ENST00000578773 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms