RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 PTPRN2Q92932 1015 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 MIB2Q96AX9 1013 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 TMA16Q96EY4 203 aaKnown RBP8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 CALML4Q96GE6 196 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 PRICKLE1Q96MT3 831 aaPredicted RBP8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 FOXP3Q9BZS1 431 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 ZNF71Q9NQZ8 489 aaPredicted RBP8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 FOXJ2Q9P0K8 574 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 SCML1Q9UN30 329 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 DOLKQ9UPQ8 538 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 PCDHA5Q9Y5H7 936 aa8.3□□□□□ -1.08
SLC46A1-201ENST00000578217 SHANK1Q9Y566 2161 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TRPM6Q9BX84 2022 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 CCDC187A0A096LP49 1063 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 PLD2O14939 933 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 MUSKO15146 869 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TGFB1I1O43294 461 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 PLRG1O43660 514 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TBL1XO60907 577 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 SEMA7AO75326 666 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 ATP5BP06576 529 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 SFTPCP11686 197 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 BMP2P12643 396 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TNNI1P19237 187 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 ITIH1P19827 911 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 GJB2P29033 226 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 PTGIRP43119 386 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 POLE2P56282 527 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 RELBQ01201 579 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 CNTN1Q12860 1018 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 OVGP1Q12889 678 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 KCNAB2Q13303 367 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 MORC3Q14149 939 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 FZD2Q14332 565 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 STAT4Q14765 748 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 SNRNP35Q16560 246 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 BMT2Q1RMZ1 405 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 DEFB133Q30KQ1 61 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 FAM133BQ5BKY9 247 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 AGBL4Q5VU57 503 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 ARL6IP4Q66PJ3 421 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 NADSYN1Q6IA69 706 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 OR6B2Q6IFH4 312 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 GCNT7Q6ZNI0 430 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 PRPF39Q86UA1 669 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TRIM69Q86WT6 500 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 ZNF548Q8NEK5 533 aaPredicted RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 JPH3Q8WXH2 748 aaPredicted RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TNIP3Q96KP6 325 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 RPL10LQ96L21 214 aaKnown RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 SLC12A9Q9BXP2 914 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 CALN1Q9BXU9 219 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 TCEAL2Q9H3H9 227 aaPredicted RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 CLIC5Q9NZA1 410 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 STIM2Q9P246 746 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 SFMBT1Q9UHJ3 866 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 STOML2Q9UJZ1 356 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 ACSL6Q9UKU0 697 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 PNMA8BQ9ULN7 279 aaPredicted RBP8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 ERVW-1Q9UQF0 538 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 DAAM1Q9Y4D1 1078 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 PCDHGA7Q9Y5G6 932 aa8.29□□□□□ -1.08
SLC46A1-201ENST00000578217 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 A0A087X0B3 334 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 PRAMEF33A0A0G2JMD5 474 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 FRMD3A2A2Y4 597 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 EME2A4GXA9 379 aaPredicted RBP8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 PRAMEF26H0Y7S4 382 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 TULP2O00295 520 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 NTN3O00634 580 aaPredicted RBP8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 CLIC2O15247 247 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 PRAMEF10O60809 474 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 RNASEH1O60930 286 aaKnown RBP8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 KIF20AO95235 890 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 IL1BP01584 269 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 RALAP11233 206 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 IDEP14735 1019 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 C5AR1P21730 350 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 TNFRSF8P28908 595 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 DCTP40126 519 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 ASPAP45381 313 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 HARS2P49590 506 aaKnown RBP8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 CYP2J2P51589 502 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 INHBCP55103 352 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 RPS24P62847 133 aaKnown RBP8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 TRPC3Q13507 836 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 E2F5Q15329 346 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 ZNF284Q2VY69 593 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 ZNF699Q32M78 642 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 ADGRF1Q5T601 910 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 PIK3R6Q5UE93 754 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 SLC35F3Q8IY50 421 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 SRRM1Q8IYB3 904 aaKnown RBP8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 APCDD1Q8J025 514 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 AK8Q96MA6 479 aa8.28□□□□□ -1.08
SLC46A1-201ENST00000578217 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms