RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 PCID2Q5JVF3 399 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 AFMIDQ63HM1 303 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 ZNF280DQ6N043 979 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 GPRIN1Q7Z2K8 1008 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 GALNT7Q86SF2 657 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 RASSF3Q86WH2 238 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 COLGALT2Q8IYK4 626 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 ATPAF2Q8N5M1 289 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.43□□□□□ -1.06
SKA2-203ENST00000578105 RTL3Q8N8U3 475 aaKnown RBP8.43□□□□□ -1.06
SKA2-203ENST00000578105 ATP6V0D2Q8N8Y2 350 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 DNAAF3Q8N9W5 541 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 SPPL2BQ8TCT7 592 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 NDRG1Q92597 394 aaKnown RBP8.43□□□□□ -1.06
SKA2-203ENST00000578105 PEX13Q92968 403 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 SPATA17Q96L03 361 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 RBBP8Q99708 897 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 TMEM175Q9BSA9 504 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 MYLK2Q9H1R3 596 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 TLE6Q9H808 572 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 SLCO1B3Q9NPD5 702 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 SMYD2Q9NRG4 433 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 VPS45Q9NRW7 570 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 SYBUQ9NX95 663 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 SEPT10Q9P0V9 454 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 ABT1Q9ULW3 272 aaKnown RBP8.43□□□□□ -1.06
SKA2-203ENST00000578105 TIMM13Q9Y5L4 95 aaPredicted RBP8.43□□□□□ -1.06
SKA2-203ENST00000578105 RPS6KL1Q9Y6S9 549 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 PLXNA3P51805 1871 aa8.43□□□□□ -1.06
SKA2-203ENST00000578105 FNDC1Q4ZHG4 1894 aaPredicted RBP8.43□□□□□ -1.06
SKA2-203ENST00000578105 SYNJ2BP-COX16A0A087WUM0 186 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 KCNU1A8MYU2 1149 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 TMEM114B3SHH9 223 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 FAM72CH0Y354 149 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 GOLGA8RI6L899 631 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 PLIN3O60664 434 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 SIN3BO75182 1162 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 ATP6V1G2O95670 118 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 SERPINE1P05121 402 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 DLDP09622 509 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 RHOQP17081 205 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 HOXB8P17481 243 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 COL9A1P20849 921 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 BGNP21810 368 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 TYK2P29597 1187 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 CCND3P30281 292 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 RENBPP51606 427 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 MNAT1P51948 309 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 MLLT6P55198 1093 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 PPARDQ03181 441 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 ZBTB16Q05516 673 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 RING1Q06587 406 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 HNRNPDQ14103 355 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 DSG2Q14126 1118 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 MRPL58Q14197 206 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 ANKRD20A4Q4UJ75 823 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 WASHC2DQ5SRD0 308 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 MROH9Q5TGP6 573 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 FAM72AQ5TYM5 149 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 ICE2Q659A1 982 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 FAM72DQ6L9T8 149 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 TRMT10BQ6PF06 316 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 KIAA0408Q6ZU52 694 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 CLNKQ7Z7G1 428 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 TBC1D1Q86TI0 1168 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 FAM72BQ86X60 149 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 CNTN4Q8IWV2 1026 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 UMODL1-AS1Q8N2C9 162 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 MPP5Q8N3R9 675 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 RNF169Q8NCN4 708 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 OR10T2Q8NGX3 314 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 ZSCAN18Q8TBC5 510 aaPredicted RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 CALML6Q8TD86 181 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 PPP4R1Q8TF05 950 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 PPP1R13LQ8WUF5 828 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 NSMCE1Q8WV22 266 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 SCG3Q8WXD2 468 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 OVCA2Q8WZ82 227 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 SKA1Q96BD8 255 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 SLC39A13Q96H72 371 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 NSL1Q96IY1 281 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 TSNARE1Q96NA8 513 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 RANBP9Q96S59 729 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 ARNT2Q9HBZ2 717 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 GLOD4Q9HC38 313 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 TRPC7Q9HCX4 862 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 NPHS2Q9NP85 383 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 COX16Q9P0S2 106 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 HSFX1Q9UBD0 423 aa8.42□□□□□ -1.06
SKA2-203ENST00000578105 APOBEC2Q9Y235 224 aaKnown RBP8.42□□□□□ -1.06
SKA2-203ENST00000578105 IGLV3-10A0A075B6K4 115 aa8.41□□□□□ -1.06
SKA2-203ENST00000578105 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
SKA2-203ENST00000578105 ZCWPW2A0A1B0GU75 182 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms