RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 ARF5P84085 180 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ECT2LQ008S8 904 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 GBE1Q04446 702 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ZNF33AQ06730 810 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 SEL1L2Q5TEA6 688 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 PAPD7Q5XG87 772 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ZSCAN30Q86W11 494 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 RFX6Q8HWS3 928 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 RASGEF1CQ8N431 466 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 OR7D4Q8NG98 312 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 USP33Q8TEY7 942 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 HDAC11Q96DB2 347 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 FOXQ1Q9C009 403 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 SLC39A8Q9C0K1 460 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ATP13A1Q9HD20 1204 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 THAP10Q9P2Z0 257 aaPredicted RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 SNX12Q9UMY4 172 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 MTF2Q9Y483 593 aaPredicted RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 NCAM2O15394 837 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CST8O60676 142 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 PRAMEF11O60813 436 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 RNF40O75150 1001 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 TJP3O95049 919 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CD160O95971 181 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 PEX11BO96011 259 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 PDGFBP01127 241 aaPredicted RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 C7P10643 843 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 PRLRP16471 622 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 MX2P20592 715 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 GARSP41250 739 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 SERPINH1P50454 418 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 CLCN5P51795 746 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CLCN6P51797 869 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 GEMIN4P57678 1058 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 SLC10A2Q12908 348 aaPredicted RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 ZNF211Q13398 564 aaPredicted RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 ZNF234Q14588 700 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 EGFLAMQ63HQ2 1017 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 MAMSTRQ6ZN01 415 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 TRMT11Q7Z4G4 463 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 ZNF513Q8N8E2 541 aaPredicted RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 IL17RCQ8NAC3 791 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CASKIN2Q8WXE0 1202 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CELF6Q96J87 481 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 TSGA13Q96PP4 275 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 NAPGQ99747 312 aaPredicted RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 GABRG3Q99928 467 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 CIPCQ9C0C6 399 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CHRDQ9H2X0 955 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 TMEM245Q9H330 911 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 CD248Q9HCU0 757 aa12.98□□□□□ -0.33
MKS1-206ENST00000577824 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
MKS1-206ENST00000577824 ATP9BO43861 1147 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 SNAP91O60641 907 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 MAFKO60675 156 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 PECAM1P16284 738 aaPredicted RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 TCP1P17987 556 aaKnown RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 GLDCP23378 1020 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 CTSOP43234 321 aaPredicted RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 DNA2P51530 1060 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 IL10RBQ08334 325 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 RFTN1Q14699 578 aaPredicted RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 INO80DQ53TQ3 878 aaPredicted RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 KAZNQ674X7 775 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 IL31Q6EBC2 164 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 RETSATQ6NUM9 610 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 Q6ZS52 159 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 BZW1Q7L1Q6 419 aaKnown RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 SLC13A5Q86YT5 568 aaPredicted RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 TP53INP2Q8IXH6 220 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 SH2D3CQ8N5H7 860 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 MAML1Q92585 1016 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 PBKQ96KB5 322 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 CEP44Q9C0F1 390 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 RBM12Q9NTZ6 932 aaKnown RBP12.97□□□□□ -0.33
MKS1-206ENST00000577824 SLC25A13Q9UJS0 675 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
MKS1-206ENST00000577824 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 CTAGE9A4FU28 777 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 CBX4O00257 560 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 DFFAO00273 331 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms