RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GAD2Q05329 585 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ADCY2Q08462 1091 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SLC12A1Q13621 1099 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RUNX3Q13761 415 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ALFQ53S48 1182 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SEL1L2Q5TEA6 688 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RFWD3Q6PCD5 774 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DRICH1Q6PGQ1 229 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TSSK4Q6SA08 328 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 BZW1Q7L1Q6 419 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CHSY1Q86X52 802 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ETFBKMTQ8IXQ9 262 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HJURPQ8NCD3 748 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 COG1Q8WTW3 980 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FATE1Q969F0 183 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RPRD1AQ96P16 312 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NAP1L3Q99457 506 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HERPUD2Q9BSE4 406 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CALN1Q9BXU9 219 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MAK16Q9BXY0 300 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LRRC19Q9H756 370 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ECT2Q9H8V3 914 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LTB4R2Q9NPC1 389 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HPS4Q9NQG7 708 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CDC23Q9UJX2 597 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MTF2Q9Y483 593 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CHD5Q8TDI0 1954 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FREM2Q5SZK8 3169 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ILVBLA1L0T0 632 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CACNG3O60359 315 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CST8O60676 142 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CNTN5O94779 1100 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CISD3P0C7P0 127 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KRT10P13645 584 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CXCR5P32302 372 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 IFNAR2P48551 515 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SGSHP51688 502 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RPS24P62847 133 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NR1H3Q13133 447 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 XRCC4Q13426 336 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SIX1Q15475 284 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LPAL2Q16609 132 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CYP1B1Q16678 543 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LY6G5CQ5SRR4 150 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NCBP2-AS2Q69YL0 99 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 AADACL2Q6P093 401 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DNASE1L2Q92874 299 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ALG14Q96F25 216 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KXD1Q9BQD3 176 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 BRD8Q9H0E9 1235 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MAGEH1Q9H213 219 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NOL6Q9H6R4 1146 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HOMER3Q9NSC5 361 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ETNK2Q9NVF9 386 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MPP6Q9NZW5 540 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SLC27A6Q9Y2P4 619 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 OR51B4Q9Y5P0 310 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 WNT6Q9Y6F9 365 aa11.42□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TYW5A2RUC4 315 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 OTOL1A6NHN0 477 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FAM170BA6NMN3 283 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 APOL1O14791 398 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF185O15231 689 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DAPK3O43293 454 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CEP104O60308 925 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TBL1XO60907 577 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF189O75820 626 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ADH1CP00326 375 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FGGP02679 453 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CYP17A1P05093 508 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TYRP14679 529 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 OR1E1P30953 314 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GDI1P31150 447 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SERPINB6P35237 376 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GJC1P36383 396 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 IRAK1P51617 712 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SLC10A2Q12908 348 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF177Q13360 481 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FZD5Q13467 585 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MLF2Q15773 248 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CCNG2Q16589 344 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PARP15Q460N3 678 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZFYVE27Q5T4F4 411 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 C6orf118Q5T5N4 469 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CXorf57Q6NSI4 855 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RWDD4Q6NW29 188 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PDZD3Q86UT5 571 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CCDC50Q8IVM0 306 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ARHGAP12Q8IWW6 846 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 YAF2Q8IY57 180 aa11.41□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CFAP52Q8N1V2 620 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms