RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 CIR1Q86X95 450 aaPredicted RBP12.67□□□□□ -0.38
RARA-208ENST00000577646 APCDD1Q8J025 514 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 ALLCQ8N6M5 410 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 TXNDC5Q8NBS9 432 aaKnown RBP12.67□□□□□ -0.38
RARA-208ENST00000577646 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 ISG20Q96AZ6 181 aaKnown RBP12.67□□□□□ -0.38
RARA-208ENST00000577646 ALS2CR12Q96Q35 445 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 PHOX2BQ99453 314 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 CALN1Q9BXU9 219 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 MAK16Q9BXY0 300 aaKnown RBP12.67□□□□□ -0.38
RARA-208ENST00000577646 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 CEP44Q9C0F1 390 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 TMEM245Q9H330 911 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 LRRC19Q9H756 370 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 ATP13A1Q9HD20 1204 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 GPATCH2LQ9NWQ4 482 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 DNAI1Q9UI46 699 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 STON1Q9Y6Q2 735 aa12.67□□□□□ -0.38
RARA-208ENST00000577646 MACROD2A1Z1Q3 448 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 DCLK1O15075 740 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 ZNF189O75820 626 aaPredicted RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 APBB3O95704 486 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 MSNP26038 577 aaKnown RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 CNR2P34972 360 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 SEC13P55735 322 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 ZBTB16Q05516 673 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 ZNF33AQ06730 810 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 SERINC3Q13530 473 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 RFTN1Q14699 578 aaPredicted RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 PAFAH1B3Q15102 231 aaKnown RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 PTPRNQ16849 979 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 EMC10Q5UCC4 262 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 IL31Q6EBC2 164 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 Q6ZS52 159 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 NT5DC3Q86UY8 548 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 FATE1Q969F0 183 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 MRGPRX3Q96LB0 322 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 CCDC114Q96M63 670 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 ZNF599Q96NL3 588 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 RNF157Q96PX1 679 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 SPON2Q9BUD6 331 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 BRD8Q9H0E9 1235 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 HCN2Q9UL51 889 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 TFR2Q9UP52 801 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
RARA-208ENST00000577646 DMDP11532 3685 aa12.66□□□□□ -0.38
RARA-208ENST00000577646 A0A0D9SEW6 157 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 LRRD1A4D1F6 860 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 RASA4BC9J798 803 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 SGK1O00141 431 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 ALOX15BO15296 676 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 RASA4O43374 803 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 GFRA3O60609 400 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 ADAM23O75077 832 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 PALMO75781 387 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 ZMPSTE24O75844 475 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 HOXB2P14652 356 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 MX2P20592 715 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 PTPN7P35236 360 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 NBL1P41271 181 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 NR2C2P49116 596 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 RWDD2BP57060 319 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 PPP2R5EQ16537 467 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 ATP13A4Q4VNC1 1196 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 TFDP3Q5H9I0 405 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 ZC3H14Q6PJT7 736 aaKnown RBP12.65□□□□□ -0.38
RARA-208ENST00000577646 DSG4Q86SJ6 1040 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 SH2D3CQ8N5H7 860 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 TSTD1Q8NFU3 115 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 OR52K2Q8NGK3 314 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 NELL1Q92832 810 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 PSMB7Q99436 277 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 KLC2Q9H0B6 622 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 NOL6Q9H6R4 1146 aaKnown RBP12.65□□□□□ -0.38
RARA-208ENST00000577646 HAUS2Q9NVX0 235 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 VPS51Q9UID3 782 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 SCML1Q9UN30 329 aa12.65□□□□□ -0.38
RARA-208ENST00000577646 C3orf70A6NLC5 250 aaPredicted RBP12.64□□□□□ -0.39
RARA-208ENST00000577646 PROB1E7EW31 1015 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 CBX4O00257 560 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 RNASEH1O60930 286 aaKnown RBP12.64□□□□□ -0.39
RARA-208ENST00000577646 KRT1P04264 644 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 AMPD1P23109 780 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 IL12RB1P42701 662 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 PEX5P50542 639 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 IL10RBQ08334 325 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 SLC9A4Q6AI14 798 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 C11orf74Q86VG3 221 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 SFTPA1Q8IWL2 248 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 CCDC33Q8N5R6 958 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 PCDH20Q8N6Y1 951 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms