RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 SCAPQ12770 1279 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 PUM1Q14671 1186 aaKnown RBP eCLIP15.63■□□□□ 0.09
SMG6-220ENST00000576218 ARID5BQ14865 1188 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 CST6Q15828 149 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 CCDC122Q5T0U0 273 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 C9orf64Q5T6V5 341 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 HGSNATQ68CP4 663 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 LINGO4Q6UY18 593 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 Q6ZVU0 165 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 OR7D4Q8NG98 312 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 CEP76Q8TAP6 659 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 RMDN1Q96DB5 314 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 PABPC3Q9H361 631 aaKnown RBP15.63■□□□□ 0.09
SMG6-220ENST00000576218 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 FBXL12Q9NXK8 326 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 PCSK1NQ9UHG2 260 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 FZD10Q9ULW2 581 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 PLXND1Q9Y4D7 1925 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 A0A1W2PP55 124 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 PATE3B3GLJ2 98 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 C1QTNF3-AMACRE9PGA6 284 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 FAM72CH0Y354 149 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 MID1O15344 667 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 GDF9O60383 454 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 RAMP2O60895 175 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 SEMA4FO95754 770 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 VAV1P15498 845 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 L1CAMP32004 1257 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 SLC8A1P32418 973 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 HOXD12P35452 270 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 SSR1P43307 286 aaKnown RBP15.62■□□□□ 0.09
SMG6-220ENST00000576218 DNA2P51530 1060 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 OGDHQ02218 1023 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 DUOXA1Q1HG43 343 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 FAM72AQ5TYM5 149 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 DCAF12L1Q5VU92 463 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 FAM46CQ5VWP2 391 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 FAM72DQ6L9T8 149 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 DGLUCYQ7Z3D6 616 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 FAM72BQ86X60 149 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 SLC41A1Q8IVJ1 513 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 VSTM4Q8IW00 320 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 PYROXD2Q8N2H3 581 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 SH2D3CQ8N5H7 860 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 CADM4Q8NFZ8 388 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 OR8K1Q8NGG5 319 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 ALG14Q96F25 216 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 ISCUQ9H1K1 167 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 RETREG1Q9H6L5 497 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 SGK2Q9HBY8 427 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 AP4E1Q9UPM8 1137 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 OR51B4Q9Y5P0 310 aa15.62■□□□□ 0.09
SMG6-220ENST00000576218 A0A087X0T9 212 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 TMEM191CA6NGB0 347 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 ATP9BO43861 1147 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 AKR1B10O60218 316 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 FSBPO95073 299 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 FAM228BP0C875 321 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 SRCP12931 536 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 EIF4A3P38919 411 aaKnown RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 CLCN6P51797 869 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 GEMIN4P57678 1058 aaKnown RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 GFPT1Q06210 699 aaPredicted RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 POLD3Q15054 466 aaPredicted RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 ALKBH5Q6P6C2 394 aaKnown RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 USP30Q70CQ3 517 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 FNIP1Q8TF40 1166 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 PTPRN2Q92932 1015 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 ZNF419Q96HQ0 510 aaPredicted RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 PSMB7Q99436 277 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 RTKNQ9BST9 563 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 NUP85Q9BW27 656 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 GTPBP2Q9BX10 602 aaKnown RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 THAP2Q9H0W7 228 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 DHX35Q9H5Z1 703 aaKnown RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 DYRK4Q9NR20 520 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 TMEM74BQ9NUR3 256 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 TMEM248Q9NWD8 314 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 DONSONQ9NYP3 566 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 EVLQ9UI08 416 aaPredicted RBP15.61■□□□□ 0.09
SMG6-220ENST00000576218 PILRBQ9UKJ0 227 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 HS3ST2Q9Y278 367 aa15.61■□□□□ 0.09
SMG6-220ENST00000576218 LNP1A1A4G5 178 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 LRRC72A6NJI9 287 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 EEF2KO00418 725 aaKnown RBP15.6■□□□□ 0.09
SMG6-220ENST00000576218 FGF10O15520 208 aaPredicted RBP15.6■□□□□ 0.09
SMG6-220ENST00000576218 IGLV3-19P01714 112 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 C5AR1P21730 350 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 GLDCP23378 1020 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 MAOBP27338 520 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 ACSL1P33121 698 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 MAPK8P45983 427 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 POM121L1PQ3SYA9 428 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 PPP6R3Q5H9R7 873 aaPredicted RBP15.6■□□□□ 0.09
SMG6-220ENST00000576218 ERMARDQ5T6L9 678 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 MANEALQ5VSG8 457 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 C22orf39Q6P5X5 142 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 CNGA4Q8IV77 575 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms