RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 FOXD4L1Q9NU39 408 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMG6-218ENST00000575454 UCKL1Q9NWZ5 548 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 IL17BQ9UHF5 180 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 SLC25A13Q9UJS0 675 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 RCOR1Q9UKL0 485 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 MAPK8IP1Q9UQF2 711 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 MYOFQ9NZM1 2061 aa9.26□□□□□ -0.93
SMG6-218ENST00000575454 UTP20O75691 2785 aaKnown RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 COL5A1P20908 1838 aaPredicted RBP9.26□□□□□ -0.93
SMG6-218ENST00000575454 BOD1L1Q8NFC6 3051 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 A0A1W2PQU0 124 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 TCAF2A6NFQ2 919 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 KCNU1A8MYU2 1149 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
SMG6-218ENST00000575454 K7ESM1 405 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 M0QYV0 167 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 ZSCAN22P10073 491 aaPredicted RBP9.25□□□□□ -0.93
SMG6-218ENST00000575454 SFTPCP11686 197 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 PDGFRAP16234 1089 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 RPIAP49247 311 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 SKOR1P84550 965 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 DLG2Q15700 870 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 ARL13BQ3SXY8 428 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 POM121L1PQ3SYA9 428 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 ZCWPW2Q504Y3 356 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 TCERG1LQ5VWI1 586 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 RAP1GAP2Q684P5 730 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 ZCCHC8Q6NZY4 707 aaKnown RBP9.25□□□□□ -0.93
SMG6-218ENST00000575454 TMEM270Q6UE05 265 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 RBM44Q6ZP01 1051 aaKnown RBP9.25□□□□□ -0.93
SMG6-218ENST00000575454 ZSCAN30Q86W11 494 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 CCAR2Q8N163 923 aaKnown RBP9.25□□□□□ -0.93
SMG6-218ENST00000575454 TMIEQ8NEW7 156 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 OR13H1Q8NG92 308 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 GLMNQ92990 594 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 MED15Q96RN5 788 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 MIS12Q9H081 205 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 DNAJC28Q9NX36 388 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 SARDHQ9UL12 918 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 SATB2Q9UPW6 733 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 NAALADL1Q9UQQ1 740 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 PCDHB4Q9Y5E5 795 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 HS3ST3A1Q9Y663 406 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 CSNK1G3Q9Y6M4 447 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 NOTCH2Q04721 2471 aa9.25□□□□□ -0.93
SMG6-218ENST00000575454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 A6NNZ2 444 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 PIK3R2O00459 728 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 GABBR2O75899 941 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 GJB6O95452 261 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CSF2P04141 144 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 PRNPP04156 253 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 NTRK1P04629 796 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 ITGB2P05107 769 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 FYNP06241 537 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 GIMD1P0DJR0 217 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 VAV1P15498 845 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 PFKFB1P16118 471 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 PRLRP16471 622 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 SYKP43405 635 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 METAP1P53582 386 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 KRT83P78385 493 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CETN1Q12798 172 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 ZNF177Q13360 481 aaPredicted RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 ZNF284Q2VY69 593 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 FOXD4L6Q3SYB3 417 aaPredicted RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 CBWD6Q4V339 395 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 ZC3H12AQ5D1E8 599 aaKnown RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 DCAF17Q5H9S7 520 aaPredicted RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 C3orf38Q5JPI3 329 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CBWD3Q5JTY5 395 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CBWD5Q5RIA9 395 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 FOXD4L3Q6VB84 417 aaPredicted RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 Q6ZSR6 202 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 ABI3BPQ7Z7G0 1075 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CLEC14AQ86T13 490 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 TAC4Q86UU9 113 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 UBR7Q8N806 425 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 WDR36Q8NI36 951 aaKnown RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 STK32AQ8WU08 396 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 TFAP2BQ92481 460 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CCNL2Q96S94 520 aaPredicted RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 TSG101Q99816 390 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 FEM1AQ9BSK4 669 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 HDAC8Q9BY41 377 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 POPDC2Q9HBU9 364 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 IPO11Q9UI26 975 aaKnown RBP9.24□□□□□ -0.93
SMG6-218ENST00000575454 SALL4Q9UJQ4 1053 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 VPS28Q9UK41 221 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 CA5BQ9Y2D0 317 aa9.24□□□□□ -0.93
SMG6-218ENST00000575454 PTPRBP23467 1997 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 LY6G6EA0A0G2JKS1 128 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 SPTY2D1-AS1A0A0U1RR47 76 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 A0A1B0GVL5 298 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 CPED1A4D0V7 1026 aa9.23□□□□□ -0.93
SMG6-218ENST00000575454 EME2A4GXA9 379 aaPredicted RBP9.23□□□□□ -0.93
SMG6-218ENST00000575454 CDRT15L2A8MXV6 281 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms