RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ZBED5Q49AG3 693 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 HSF5Q4G112 596 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-212ENST00000574799 SEL1L3Q68CR1 1132 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 PGM2L1Q6PCE3 622 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 MZB1Q8WU39 189 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 VCPIP1Q96JH7 1222 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 NLRP4Q96MN2 994 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 C1orf50Q9BV19 199 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 SPATC1LQ9H0A9 340 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 GTSE1Q9NYZ3 720 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 RALGAPA2Q2PPJ7 1873 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TRPM7Q96QT4 1865 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TMEM191CA6NGB0 347 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 RFPL1O75677 317 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 RNASEH2AO75792 299 aaKnown RBP9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TPTEP56180 551 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 YWHAZP63104 245 aaKnown RBP9.75□□□□□ -0.85
CCDC40-212ENST00000574799 MMRN1Q13201 1228 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 GEN1Q17RS7 908 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 HSDL1Q3SXM5 330 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 FGD3Q5JSP0 725 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TMC5Q6UXY8 1006 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 BBS12Q6ZW61 710 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 CPNE9Q8IYJ1 553 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 ZNF781Q8N8C0 355 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 ANKRD36BP1Q96IX9 119 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 DHRS4Q9BTZ2 278 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 PCDHAC1Q9H158 963 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 ELP3Q9H9T3 547 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 IL1RL2Q9HB29 575 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 SPC25Q9HBM1 224 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 SACM1LQ9NTJ5 587 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 CDYLQ9Y232 598 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 DOCK3Q8IZD9 2030 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 LRRIQ4A6NIV6 560 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 PGK2P07205 417 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 KDELR1P24390 212 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TKTP29401 623 aaKnown RBP9.75□□□□□ -0.85
CCDC40-212ENST00000574799 MGAT5BQ3V5L5 792 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 SLC9B1Q4ZJI4 515 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 PPM1JQ5JR12 505 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 UNC5AQ6ZN44 842 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 HERC6Q8IVU3 1022 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TMEM143Q96AN5 459 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 SNX27Q96L92 541 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 KATNBL1Q9H079 304 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 MRPL40Q9NQ50 206 aaKnown RBP9.75□□□□□ -0.85
CCDC40-212ENST00000574799 HOXC10Q9NYD6 342 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 TLK1Q9UKI8 766 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 PPME1Q9Y570 386 aa9.75□□□□□ -0.85
CCDC40-212ENST00000574799 H3BNH8 94 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 VAPBO95292 243 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 ABCG1P45844 678 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 ADAM17P78536 824 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 RALGDSQ12967 914 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TEX44Q53QW1 395 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 AARS2Q5JTZ9 985 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 LRRC38Q5VT99 294 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 SAPCD2Q86UD0 394 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 IFNEQ86WN2 208 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 HEATR4Q86WZ0 1026 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 THNSL1Q8IYQ7 743 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 OFCC1Q8IZS5 231 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 BPIFB6Q8NFQ5 453 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 OR52B2Q96RD2 323 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 SYT17Q9BSW7 474 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PORCNQ9H237 461 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 RSAD1Q9HA92 442 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 APOBEC3GQ9HC16 384 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 DDX28Q9NUL7 540 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 RBAKQ9NYW8 714 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 SLC17A6Q9P2U8 582 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PADI4Q9UM07 663 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 DGKBQ9Y6T7 804 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 APOC4-APOC2K7ER74 178 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TRDMT1O14717 391 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 KCNH1O95259 989 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 IL1BP01584 269 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PIGRP01833 764 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 APOC2P02655 101 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 ACO1P21399 889 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TBXAS1P24557 533 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 RAD23AP54725 363 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TAP1Q03518 808 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 APOFQ13790 326 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PGS1Q32NB8 556 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 FRA10AC1Q70Z53 315 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 GPR180Q86V85 440 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 APBB2Q92870 758 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 CDCA5Q96FF9 252 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 NSMCE3Q96MG7 304 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 ZFYVE28Q9HCC9 887 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 DNAJC28Q9NX36 388 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 V9GYQ6 96 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 AP3B1O00203 1094 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PFDN6O15212 129 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 ZBTB14O43829 449 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 MAN1A2O60476 641 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms