RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PCDH9Q9HC56 1237 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 EPB41L5Q9HCM4 733 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 NUMBLQ9Y6R0 609 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 SHROOM3Q8TF72 1996 aa24.58■■□□□ 1.52
ATPAF1-213ENST00000574428 MYOFQ9NZM1 2061 aa24.58■■□□□ 1.52
ATPAF1-213ENST00000574428 ECI2O75521 394 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 NFATC1O95644 943 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 ADH5P11766 374 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 PSMC3P17980 439 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 WASHC5Q12768 1159 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 PDGFRLQ15198 375 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 TRADDQ15628 312 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 FIBINQ8TAL6 211 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 CCDC110Q8TBZ0 833 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 SP110Q9HB58 689 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 ATP13A1Q9HD20 1204 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 PRUNE2Q8WUY3 3088 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 TARSL2A2RTX5 802 aaKnown RBP24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 C2CD4DB7Z1M9 353 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 ADH1CP00326 375 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 GLDCP23378 1020 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 CD70P32970 193 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 RPL22P35268 128 aaKnown RBP24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 ZNF33AQ06730 810 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 LMAN2Q12907 356 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 ZBTB17Q13105 803 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 HTR4Q13639 388 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 ZNF783Q6ZMS7 281 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 LEKR1Q6ZMV7 388 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 TAB3Q8N5C8 712 aaPredicted RBP24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 NAT16Q8N8M0 369 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 FERMT1Q9BQL6 677 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 FEM1AQ9BSK4 669 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 HPS4Q9NQG7 708 aa24.57■■□□□ 1.52
ATPAF1-213ENST00000574428 OTOL1A6NHN0 477 aaPredicted RBP24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 PTPN3P26045 913 aa24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 DUPD1Q68J44 220 aa24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 ASTLQ6HA08 431 aaPredicted RBP24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 TIGD7Q6NT04 549 aaPredicted RBP24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 VPS28Q9UK41 221 aa24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 SNX24Q9Y343 169 aa24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 OR51B4Q9Y5P0 310 aa24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 CHD5Q8TDI0 1954 aa24.56■■□□□ 1.52
ATPAF1-213ENST00000574428 C5orf60A6NFR6 353 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 ANHXE9PGG2 379 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 MATN3O15232 486 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 STK10O94804 968 aaKnown RBP24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 GDI1P31150 447 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 ADCY8P40145 1251 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 OXCT1P55809 520 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 GPS1Q13098 491 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 P3H1Q32P28 736 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 USP33Q8TEY7 942 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 CASKIN2Q8WXE0 1202 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 ACE2Q9BYF1 805 aaPredicted RBP24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 ABCB8Q9NUT2 735 aa24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 ARGLU1Q9NWB6 273 aaPredicted RBP24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 KIAA1522Q9P206 1035 aaPredicted RBP24.55■■□□□ 1.52
ATPAF1-213ENST00000574428 A0A0A0MRY4 1105 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 CBX4O00257 560 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 HOXC11O43248 304 aaPredicted RBP24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 MTSS1O43312 755 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 PRAMEF11O60813 436 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 PEX11BO96011 259 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 JCHAINP01591 159 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 CCNB1P14635 433 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 HLA-FP30511 346 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ETFBP38117 255 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 RPL21P46778 160 aaKnown RBP24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 GAD2Q05329 585 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 IL10RBQ08334 325 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 APCDD1Q8J025 514 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ZNF567Q8N184 647 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 TTC8Q8TAM2 541 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ALG14Q96F25 216 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ZNF419Q96HQ0 510 aaPredicted RBP24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 SPATA13Q96N96 652 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ECT2Q9H8V3 914 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 UNC80Q8N2C7 3258 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 BHMG1C9JSJ3 638 aaPredicted RBP24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 KDELR3O43731 214 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 SNAP91O60641 907 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 GCATO75600 419 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 LEXMQ3ZCV2 418 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ANKRD20A2Q5SQ80 823 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ANKRD20A1Q5TYW2 823 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ANKRD20A3Q5VUR7 823 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 LMLNQ96KR4 655 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 TRMT61BQ9BVS5 477 aaKnown RBP24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 PDFQ9HBH1 243 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 KLHL8Q9P2G9 620 aaPredicted RBP24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 ACTL7AQ9Y615 435 aa24.54■■□□□ 1.52
ATPAF1-213ENST00000574428 IVDP26440 423 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 ACTN2P35609 894 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 IFI35P80217 286 aaPredicted RBP24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 C12orf40Q86WS4 652 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 IFT20Q8IY31 132 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 CCHCR1Q8TD31 782 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 IFT81Q8WYA0 676 aa24.53■■□□□ 1.52
ATPAF1-213ENST00000574428 SEC14L1Q92503 715 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms