RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 TTC19Q6DKK2 380 aaPredicted RBP29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 NAPEPLDQ6IQ20 393 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 LINC00523Q86TU6 105 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 NSMCE1Q8WV22 266 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 SP110Q9HB58 689 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 IKBKGQ9Y6K9 419 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 SRRM3A6NNA2 597 aaPredicted RBP29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 LATS1O95835 1130 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 MBL2P11226 248 aaPredicted RBP29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 MGAT1P26572 445 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 CDH4P55283 916 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 EFTUD2Q15029 972 aaKnown RBP eCLIP29.71■■■□□ 2.354e-7■■■■■ 34.6
CTDNEP1-208ENST00000573600 KBTBD12Q3ZCT8 623 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 LEKR1Q6ZMV7 388 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 TRABD2AQ86V40 505 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 ELMOD1Q8N336 334 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 GKN1Q9NS71 199 aa29.71■■■□□ 2.35
CTDNEP1-208ENST00000573600 LCHNA4D1U4 455 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 SYN1P17600 705 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 PGAM1P18669 254 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 KRT15P19012 456 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 CASC4Q6P4E1 433 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 OTOP3Q7RTS5 596 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 KREMEN2Q8NCW0 462 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 OR52K1Q8NGK4 314 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 DCAKDQ8WVC6 231 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 SLC44A1Q8WWI5 657 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 MRRFQ96E11 262 aaKnown RBP29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 PLAC1Q9HBJ0 212 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 BFARQ9NZS9 450 aa29.7■■■□□ 2.34
CTDNEP1-208ENST00000573600 C8AP07357 584 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 CHN1P15882 459 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 LSP1P33241 339 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 NPY2RP49146 381 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 GEMP55040 296 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 ERVFC1P60507 584 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 UBE3AQ05086 875 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 IL10RBQ08334 325 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 ADGRF1Q5T601 910 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 CIR1Q86X95 450 aaPredicted RBP29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 SRRM1Q8IYB3 904 aaKnown RBP29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 ARNTL2Q8WYA1 636 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 MYEOVQ96EZ4 313 aa29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 ALG13Q9NP73 1137 aaKnown RBP29.69■■■□□ 2.34
CTDNEP1-208ENST00000573600 OLFM2O95897 454 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 PEX11BO96011 259 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 GLUD1P00367 558 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 KLKB1P03952 638 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 HLA-DQB2P05538 268 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 BRAFP15056 766 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 SERINC3Q13530 473 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 RFWD3Q6PCD5 774 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 ZNF354CQ86Y25 554 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 MRPL43Q8N983 215 aaKnown RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 DNAAF3Q8N9W5 541 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 OXNAD1Q96HP4 312 aaPredicted RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 TRPC7Q9HCX4 862 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 SAMD15Q9P1V8 674 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 AGO1Q9UL18 857 aaKnown RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 ZFP37Q9Y6Q3 630 aaPredicted RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 CLDN11O75508 207 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 C1QAP02745 245 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 INHBAP08476 426 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 IRF1P10914 325 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 TNK2Q07912 1038 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 MARC1Q5VT66 337 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 ZNF771Q7L3S4 317 aaPredicted RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 LRRC6Q86X45 466 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 MDM1Q8TC05 714 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 MRPS31Q92665 395 aaKnown RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 LBHD1Q9BQE6 289 aaPredicted RBP29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 HTATIP2Q9BUP3 242 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 SYBUQ9NX95 663 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 STOML2Q9UJZ1 356 aa29.68■■■□□ 2.34
CTDNEP1-208ENST00000573600 DENND4CQ5VZ89 1909 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 IQANK1A0A1B0GTG1 560 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 C2orf71A6NGG8 1288 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 GABRR2P28476 465 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 CDH17Q12864 832 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 CHST9Q7L1S5 443 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 RTL10Q7L3V2 364 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 PRPF39Q86UA1 669 aaKnown RBP29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 SPPL3Q8TCT6 385 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 MAGEH1Q9H213 219 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 INTS9Q9NV88 658 aaKnown RBP29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 MOCS1Q9NZB8 636 aa29.67■■■□□ 2.34
CTDNEP1-208ENST00000573600 MTCL1Q9Y4B5 1905 aaKnown RBP29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 MAGEB16A2A368 324 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 J3KR12 359 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 LPXNO60711 386 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 ALDH1A2O94788 518 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 HDCP19113 662 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 TTC39BQ5VTQ0 682 aaPredicted RBP29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 PLPP4Q5VZY2 271 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 SLC26A11Q86WA9 606 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 CFAP52Q8N1V2 620 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 TEX26Q8N6G2 289 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 POF1BQ8WVV4 589 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 TTC17Q96AE7 1141 aa29.66■■■□□ 2.34
CTDNEP1-208ENST00000573600 ZNF419Q96HQ0 510 aaPredicted RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms