RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 IGSF9Q9P2J2 1179 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 PRPF19Q9UMS4 504 aaKnown RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 FAM72CH0Y354 149 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 M0QYT0 321 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 AP1G1O43747 822 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 MPOP05164 745 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 GNL1P36915 607 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 NUMBP49757 651 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 RPL14P50914 215 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 POU5F1BQ06416 359 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 ADGRE1Q14246 886 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 PIGGQ5H8A4 983 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 ZNF484Q5JVG2 852 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 FAM72AQ5TYM5 149 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 FAM72DQ6L9T8 149 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 TMEM135Q86UB9 458 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 KCNMB4Q86W47 210 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 FAM72BQ86X60 149 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 PSTKQ8IV42 348 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 SCYL1Q96KG9 808 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 Q9H521 79 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 GJD2Q9UKL4 321 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 GNEQ9Y223 722 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 EEF2KO00418 725 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 CYP2C8P10632 490 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 PTPN3P26045 913 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 RANBP1P43487 201 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 NDUFV1P49821 464 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 KYAT1Q16773 422 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 TMA16Q96EY4 203 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 PKP2Q99959 881 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 DDX18Q9NVP1 670 aaKnown RBP17.79■□□□□ 0.44
SCARF1-205ENST00000571272 RIMS3Q9UJD0 308 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 RAP2CQ9Y3L5 183 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 NUP205Q92621 2012 aa17.79■□□□□ 0.44
SCARF1-205ENST00000571272 ZBTB24O43167 697 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 GRM5P41594 1212 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 RPL26P61254 145 aaKnown RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 KCTD2Q14681 263 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 GRM3Q14832 879 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 KIZQ2M2Z5 673 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 EML3Q32P44 896 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 OTUD1Q5VV17 481 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 SYPL2Q5VXT5 272 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 PIGZQ86VD9 579 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 NT5DC4Q86YG4 428 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 IFNLR1Q8IU57 520 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 DRAXINQ8NBI3 349 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 RP9Q8TA86 221 aaKnown RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 EIF2AQ9BY44 585 aaKnown RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 FAM124BQ9H5Z6 455 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 WDR41Q9HAD4 459 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 GRID2O43424 1007 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 TRPA1O75762 1119 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 CNMDO75829 334 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 AP2A1O95782 977 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 TKTP29401 623 aaKnown RBP17.78■□□□□ 0.44
SCARF1-205ENST00000571272 CDKL1Q00532 357 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 MYBPC1Q00872 1141 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 KLHDC10Q6PID8 442 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 UNC93AQ86WB7 457 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 KBTBD7Q8WVZ9 684 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 NDUFA13Q9P0J0 144 aa17.78■□□□□ 0.44
SCARF1-205ENST00000571272 PYGLP06737 847 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 PPARGP37231 505 aaPredicted RBP17.77■□□□□ 0.44
SCARF1-205ENST00000571272 RGS2P41220 211 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 RABGGTBP53611 331 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 ART3Q13508 389 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 SPATA6LQ8N4H0 392 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 LINC01465Q8N7H1 131 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 DTNBP1Q96EV8 351 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 CNDP1Q96KN2 507 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 NPAS2Q99743 824 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 DRC3Q9H069 523 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 RCOR3Q9P2K3 495 aaPredicted RBP17.77■□□□□ 0.44
SCARF1-205ENST00000571272 TLK1Q9UKI8 766 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 CLDN5O00501 218 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 IRF6O14896 467 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 ASLP04424 464 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 SBK3P0C264 359 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 ERCC2P18074 760 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 INHBCP55103 352 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 ZSCAN18Q8TBC5 510 aaPredicted RBP17.77■□□□□ 0.44
SCARF1-205ENST00000571272 PPP1R13LQ8WUF5 828 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 KLHL32Q96NJ5 620 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 APBA2Q99767 749 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 PIGVQ9NUD9 493 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 ATXN10Q9UBB4 475 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 RAB26Q9ULW5 256 aa17.77■□□□□ 0.44
SCARF1-205ENST00000571272 TMEM233B4DJY2 109 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 SPTLC1O15269 473 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 AKAP5P24588 427 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 NMBRP28336 390 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 ZNF460Q14592 562 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 LIPMQ5VYY2 423 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 C9orf57Q5W0N0 161 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 PTAR1Q7Z6K3 402 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms