RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 CHD6Q8TD26 2715 aa21.22■□□□□ 0.99
LITAF-205ENST00000570904 FREM2Q5SZK8 3169 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3DA0A087WVF3 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3IA0A087WXS9 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3EA0A087X179 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3KA0A087X1G2 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 FAM221BA6H8Z2 402 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3FA6NER0 549 aaPredicted RBP21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3LB9A6J9 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 VILLO15195 856 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 RTN2O75298 545 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 GFPT2O94808 682 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 MT-CO1P00395 513 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 F9P00740 461 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3HP0C7X1 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 ZNF18P17022 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 PRAMEF14Q5SWL7 426 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3GQ6DHY5 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3CQ6IPX1 549 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 DSG4Q86SJ6 1040 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TBC1D3Q8IZP1 549 aaPredicted RBP21.21■□□□□ 0.99
LITAF-205ENST00000570904 GPT2Q8TD30 523 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 CFAP57Q96MR6 1250 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 CDC6Q99741 560 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 FAM207AQ9NSI2 230 aaPredicted RBP21.21■□□□□ 0.99
LITAF-205ENST00000570904 TOR4AQ9NXH8 423 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 VPS51Q9UID3 782 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 TMEM59LQ9UK28 342 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 NOCTQ9UK39 431 aaKnown RBP21.21■□□□□ 0.99
LITAF-205ENST00000570904 PAXBP1Q9Y5B6 917 aa21.21■□□□□ 0.99
LITAF-205ENST00000570904 GOLGA8CPA6NN73 597 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 E9PAM4 449 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 EPHB6O15197 1021 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 ATXN1LP0C7T5 689 aaKnown RBP21.2■□□□□ 0.98
LITAF-205ENST00000570904 SRCP12931 536 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 CD38P28907 300 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 POLR2FP61218 127 aaKnown RBP21.2■□□□□ 0.98
LITAF-205ENST00000570904 CNTN1Q12860 1018 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 LRRC31Q6UY01 552 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 FAM131BQ86XD5 332 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 EMC1Q8N766 993 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 PIP4K2CQ8TBX8 421 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 FAM131CQ96AQ9 280 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 SERAC1Q96JX3 654 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 NLRC4Q9NPP4 1024 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 METTL5Q9NRN9 209 aaKnown RBP21.2■□□□□ 0.98
LITAF-205ENST00000570904 PPM1HQ9ULR3 514 aa21.2■□□□□ 0.98
LITAF-205ENST00000570904 A0A0D9SEW6 157 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 A0A1B0GTQ1 180 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 A0A1W2PR77 199 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 DRGXA6NNA5 263 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 C1QTNF3-AMACRE9PGA6 284 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 K7ERQ8 282 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 MCF2LO15068 1137 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 PCDHGA12O60330 932 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 SRGAP2O75044 1071 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 RRM1P23921 792 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 MAT2AP31153 395 aaKnown RBP21.19■□□□□ 0.98
LITAF-205ENST00000570904 GRK6P43250 576 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 KRT83P78385 493 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 FMO1Q01740 532 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 ARTNQ5T4W7 220 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 AGBL4Q5VU57 503 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 FAM46CQ5VWP2 391 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 RBM43Q6ZSC3 357 aaKnown RBP21.19■□□□□ 0.98
LITAF-205ENST00000570904 BNIPLQ7Z465 357 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 PHLDB2Q86SQ0 1253 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 ATP11CQ8NB49 1132 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 SKA1Q96BD8 255 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 C2orf49Q9BVC5 232 aaPredicted RBP21.19■□□□□ 0.98
LITAF-205ENST00000570904 HS3ST2Q9Y278 367 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 DMXL2Q8TDJ6 3036 aa21.19■□□□□ 0.98
LITAF-205ENST00000570904 IGLV3-10A0A075B6K4 115 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 ALOX15BO15296 676 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 LATO43561 262 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 PLRG1O43660 514 aaKnown RBP21.18■□□□□ 0.98
LITAF-205ENST00000570904 CHRNB2P17787 502 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 GLDCP23378 1020 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 JAM2P57087 298 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 ATP11AP98196 1134 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 CDR2Q01850 454 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 RAB6CQ53S08 254 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 LINGO4Q6UY18 593 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 SETD3Q86TU7 594 aaPredicted RBP21.18■□□□□ 0.98
LITAF-205ENST00000570904 ZNF677Q86XU0 584 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 GATAD2AQ86YP4 633 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 DCAF4L2Q8NA75 395 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 OR7D4Q8NG98 312 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 C1orf74Q96LT6 269 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 ELF4Q99607 663 aaPredicted RBP21.18■□□□□ 0.98
LITAF-205ENST00000570904 RAB6CQ9H0N0 254 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 FANCLQ9NW38 375 aa21.18■□□□□ 0.98
LITAF-205ENST00000570904 TP53BP1Q12888 1972 aaPredicted RBP21.17■□□□□ 0.98
LITAF-205ENST00000570904 SLC7A4O43246 635 aa21.17■□□□□ 0.98
LITAF-205ENST00000570904 SMAD6O43541 496 aaKnown RBP21.17■□□□□ 0.98
LITAF-205ENST00000570904 CYP1A1P04798 512 aaPredicted RBP21.17■□□□□ 0.98
LITAF-205ENST00000570904 CTSLP07711 333 aa21.17■□□□□ 0.98
LITAF-205ENST00000570904 TPM2P07951 284 aa21.17■□□□□ 0.98
LITAF-205ENST00000570904 SOX5P35711 763 aa21.17■□□□□ 0.98
LITAF-205ENST00000570904 FKBP15Q5T1M5 1219 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms