RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TMUB1Q9BVT8 246 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 IL21RQ9HBE5 538 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 ANLNQ9NQW6 1124 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 METTL5Q9NRN9 209 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 ADAMTS1Q9UHI8 967 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 FNDC3AQ9Y2H6 1198 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 TBC1D30Q9Y2I9 924 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 PCDHB9Q9Y5E1 797 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 SLCO1B1Q9Y6L6 691 aa12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 ASCC3Q8N3C0 2202 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-205ENST00000570828 EPHB6O15197 1021 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 ATP9BO43861 1147 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 CNTN5O94779 1100 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 IGHV4-34P06331 123 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 ZNF883P0CG24 379 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 GOT1P17174 413 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 SPINK2P20155 84 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 STAT1P42224 750 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 PI4KAP42356 2102 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 GALCP54803 685 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 ADPRHP54922 357 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 JAM2P57087 298 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 FMO1Q01740 532 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 BNC1Q01954 994 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 KIF19Q2TAC6 998 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 FAM46CQ5VWP2 391 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 Q6ZVU0 165 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 ARCQ7LC44 396 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 TFAP2DQ7Z6R9 452 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 FAM131BQ86XD5 332 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 AADATQ8N5Z0 425 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR52K2Q8NGK3 314 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 ALG14Q96F25 216 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 CAMK1GQ96NX5 476 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 C11orf70Q9BRQ4 267 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 NEUROG2Q9H2A3 272 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 TM7SF3Q9NS93 570 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 LIMA1Q9UHB6 759 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 TMEM59LQ9UK28 342 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 MAP1BP46821 2468 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-205ENST00000570828 CACNA1BQ00975 2339 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 A0A1W2PPC4 97 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 E9PAM4 449 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 C1QTNF3-AMACRE9PGA6 284 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 I6L893 689 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ALOX15BO15296 676 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 BNIP3LO60238 219 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SRGAP2O75044 1071 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 TRIM16O95361 564 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 CYP1A1P04798 512 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 MMP8P22894 467 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SDC4P31431 198 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 NSFP46459 744 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 C21orf59P57076 290 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 RACK1P63244 317 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 FAM193AP78312 1265 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ATP11AP98196 1134 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 UBXN1Q04323 297 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 TRIP6Q15654 476 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 DLG2Q15700 870 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ZNF423Q2M1K9 1284 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ALFQ53S48 1182 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 C6orf118Q5T5N4 469 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 TRNP1Q6NT89 227 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SH2D3CQ8N5H7 860 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 EMC1Q8N766 993 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 DCAF4L2Q8NA75 395 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ATP11CQ8NB49 1132 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR14C36Q8NHC7 312 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SLC30A5Q8TAD4 765 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SETD7Q8WTS6 366 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SLC6A18Q96N87 628 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 HAPLN3Q96S86 360 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SCNM1Q9BWG6 230 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ACE2Q9BYF1 805 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 TMPRSS4Q9NRS4 437 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 TPX2Q9ULW0 747 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 WASF3Q9UPY6 502 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 HS3ST2Q9Y278 367 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 ANKRD6Q9Y2G4 727 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 OR51B4Q9Y5P0 310 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 SNX11Q9Y5W9 270 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 USP24Q9UPU5 2620 aa12.68□□□□□ -0.38
CTDNEP1-205ENST00000570828 CEP192Q8TEP8 1941 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 IGLV3-10A0A075B6K4 115 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 DRGXA6NNA5 263 aa12.67□□□□□ -0.38
CTDNEP1-205ENST00000570828 FLRT2O43155 660 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms